Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1169 |
Symbol | flgJ |
ID | 4278437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1375808 |
End bp | 1376941 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133944 |
Product | flagellar rod assembly protein/muramidase FlgJ |
Protein accession | YP_749860 |
Protein GI | 114562347 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1705] Muramidase (flagellum-specific) |
TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0546909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTATGG AAAAGTTGTC AGCTTCATCG AACTTTCTGG ATCTAGGAGG ACTAGATTCA CTTCGTGTCC AAGCCCAGAA AGACGAGAAG GGGGCACTTA AAGAAGCGGC AAAGCAATTT GAAGGTATCT TTATTCAAAT GCTAATGAAA AGCATGCGAG ATGCTAATGC CGCGTTTAAG TCAGACAATC CAATGAACAG TGAAACCACC GCATTTTTTG AACAAATGCG CGATCAGCAA ATGTCAGTCG ATTTATCTAA TAAAGGCATG TTGGGGCTGG CTGAGATGAT GGTGCAGCAA TTAGACCCAG ATGATAGCCC CATTACACCA GCATCGGTAT TGCGTGGTAA TACAGACTAC AAAGTTAACC CAAGTATGTT TGTTGCTCCA GCAACAGAGT TAGATAAAGA CACTCTCGAT ATTATCGCGC CAAAAGATCA AATAGCAGCA TCGCATTCTG TTATAGATAG CGCCGAATCG ATGCGACCAA TGTCAGCCCA ACTTACTAAT GTGCTAGACG GTGAACAGTT AAATAGTGTA TTGCGCGGTG AGCAATTAGC CAGTCAAGCG GTACAAATAG GCAAAGTATT GCCGCAAGCT GATGTTACTT TGCCAAAAAG CAAAGGCATA GCTGTGAGTC AATTTACCAG CCCAGAACAT TTTATTTCAG TGTTGTATCC CCATGCTGAA AAAGCGGCTA AATCGTTAGG AACCTCAGCT GAGGTATTAA TTGCCCAGTC AGCGTTAGAA ACCGGTTGGG GCCAAAAAGT GGTACGCCGT AATGACGGCA CTATGAGCCA TAACCTGTTT AATATTAAAG CAGACAAGCG TTGGCAAGGT GATAAAACCT CAGTCAATAC GTTGGAATTT GAAAAGGGCA TTGCGGTGCA ACAAAAAGCG GATTTCAGAA TGTATGACAA CCTTGAGCAA AGCTTTAATG ACTTTGTGTC ATTTATTAGC CAAGGCGATC GTTATCAGGA TGCGCGTAAA GTTGCCAGCG AGCCAACTCA ATTTATTAAA GCGTTACAAA AAGCTGGCTA CGCCACAGAC CCTCAATATG CCAATAAAGT CATCAATGTG ATGAAATCGG TTAAAGAAGG CCTTAAATCT ATATTACCTG TGGAGACTAA ATAA
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Protein sequence | MTMEKLSASS NFLDLGGLDS LRVQAQKDEK GALKEAAKQF EGIFIQMLMK SMRDANAAFK SDNPMNSETT AFFEQMRDQQ MSVDLSNKGM LGLAEMMVQQ LDPDDSPITP ASVLRGNTDY KVNPSMFVAP ATELDKDTLD IIAPKDQIAA SHSVIDSAES MRPMSAQLTN VLDGEQLNSV LRGEQLASQA VQIGKVLPQA DVTLPKSKGI AVSQFTSPEH FISVLYPHAE KAAKSLGTSA EVLIAQSALE TGWGQKVVRR NDGTMSHNLF NIKADKRWQG DKTSVNTLEF EKGIAVQQKA DFRMYDNLEQ SFNDFVSFIS QGDRYQDARK VASEPTQFIK ALQKAGYATD PQYANKVINV MKSVKEGLKS ILPVETK
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