| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1127 |
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| Symbol | |
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| ID | 4277048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1326499 |
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| End bp | 1327395 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133901 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_749818 |
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| Protein GI | 114562305 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.390448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAG CCCCAAAAGT GATGAGCTTA CAGCCTCGTC CTTGGGGCTT TTTAGGTTCA
TTTAACGCTA TGGCTAGCCC ATGTGAATTA TTAATGGCGA TTGATGATGA GCATACTGCG
AGGCAAATGC TGACTATTGC TTACGACGAA GCAAAGCGTA TAGAACATAA ATTTAGCCGT
TTTATTGAAG GTAACGTGGT GTGGCAGTTA AATCATGCCC AAGGTAAAGC AACCTCGGTC
GATGCCGAAA CAGCTCATTT ATTACAGTTT GCTCAACAGT GTTTTCAATT AAGTGAATCA
GCTTTTGATA TCAGTGCCTG TCCTTTAATG GCGTTATGGC GCTTTGATGG TAACCATCGA
GTGCCGTTAC AAACTGATAT TGATGCCGCT TTGCTTAAGG TGGGTTTTGA TCGCATTGCA
TTGACTGATA AGACCGTTTG CATGCCTGCA GACATGAGTG TCGACTTTGG CGGTATCGGT
AAGGAATATG CGGTGGATCG CACTGCACAA ATATTAGCGA ATCGTTGGCC AAATCAATCG
GTATTAGTCA ACTTTGGGGG CGACATTGCT TGCCCTATCA CCAAAAGTGA CGGTTGGCAG
GTTGGGATTG AAAACCCGAA TAAGCTTGAT AACGCTGCAG CTCTGTTAAC CATTCGCCAA
GGGGCGTTAG CCACTAGTGG CACGACTCGG CGTTATATTG AGGTAGACGG TAAACGTTAT
GGGCATATTA TTAATCCTCA AACGGGATAC CCTGTAGAAC AAGCGCCATT ATCTGTCACT
GTGCTGGCGC CCAATTGTGT TATGGCTGGA ATGTTGGCCA CAATGTCGAT GCTAAAAGGA
GCTGATGCTG AAGATTTTTT ACAGCAACAA GGTGTCGATT TTAAGGTATT TCGTTAA
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| Protein sequence | MSKAPKVMSL QPRPWGFLGS FNAMASPCEL LMAIDDEHTA RQMLTIAYDE AKRIEHKFSR
FIEGNVVWQL NHAQGKATSV DAETAHLLQF AQQCFQLSES AFDISACPLM ALWRFDGNHR
VPLQTDIDAA LLKVGFDRIA LTDKTVCMPA DMSVDFGGIG KEYAVDRTAQ ILANRWPNQS
VLVNFGGDIA CPITKSDGWQ VGIENPNKLD NAAALLTIRQ GALATSGTTR RYIEVDGKRY
GHIINPQTGY PVEQAPLSVT VLAPNCVMAG MLATMSMLKG ADAEDFLQQQ GVDFKVFR
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