| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1111 |
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| Symbol | |
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| ID | 4277174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1310693 |
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| End bp | 1312429 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133885 |
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| Product | metallophosphoesterase |
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| Protein accession | YP_749802 |
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| Protein GI | 114562289 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.443136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACATA TTTATCGTTT ATCTATAGCT CATATTAATG ACACTCATTC TAACTTCGAA
CCTAGTCCAG TCCAATTTAG CCTGACAGCC CAGCAACACA CTTATACACT TGAAGGCCAT
TCAGGTGGCT ATGCGCGTTT AGGTTACCAA ATAGAACAGG CAAGGCAGCA AGCCGCAGCC
GAACTAACTC CATTTCTATT TTTACATGGC GGCGATAGCT TTCAGGGCAC TTTATATTTC
AGGGAGTTTC AAGGTGCGGC TAATGCACAC CTCCTTAACT TACTCAAACC TGATGCTATG
GTATTGGGTA ATCACGAAAT CGATGCAGGT AACAGCCCTG TACAAGCCTT TTTGAACCGT
ATCGATTTTC CGGTATTAGC CGGCAATATG GATTTAAGCG CAGAAGATAG ACATAAAACA
GGTCGATTAT ACGGCCACCC AATGTTGTAC GACTTTGATG ACAGCACCAG AACAGCAAAA
GTACTGATAA AGCCATTTCA CGATACCCAG ATGGCTATTA TTGGTATTAC CTTAGACCAA
ATGCATTTAA TCGCTAGGCC GGACCCCGAT ACTCATTTTG TTAATGCTAT CGACACCACC
CGTAAAACAG TTCAAAAACT GAAACAACAA GGTATTAACC ATATTATTGT ACTAAGCCAC
CTAGGTTTAG ACCAAGACCA AGAACTTGCT GCCAGTGTCG ACGGCATAAG CCTAATTGTC
GGCGGACATT CTCATACACT TCAAGGTAGT ATGAGTAACA TTGGCTTAAG CGATATTCCT
TACGCCGAAA CGATAAACTC AACGCCTATT TTGCATGCCG GAAAATATGC AGAAACACTG
GGTCTTGCCC AAATCAATTT TGATTCAAAT GGCAAAGTAA CCGAGCTTAT CGGTAATAAT
TATTTTATGC TTGATGACAA TATTCAAGTC AGCACCAAAG ACGGACAGCC TGCCGATAGC
GCTATTGCTG CTGATTTAAT CGAGCAGTTG TTCACCCATC CCAGTATTAA AGGCGCTCAG
CATGATGATG CTATTCATCA GGTCATTCAT AGCCAATACC GCCCATCATT AGATGCGCTA
GAAAACCAAA TACTGGCTCA TATACCTCGA AATTTTGTTC ACACTAGGTT ACCCAGCAAA
CAGCTCCCTC ATGGCAGTGA AATAGCCCCT TGGGTGAGTC GTAGCATGTA TAAAGCGGCT
AAATACATTG AGCCAAATAT CGATTTTGCA CTGCATAATG CTGGGGGGGT GAGGCAATCG
CTCAATAAAG GTCAGTTATC ACTTGCTGAT GTTGTTGGCC GCATTCTGCC ATTCGAATTA
CCCCTAACGC TGTATCAAAT TATGGGTAAA CACATTATTG AAGCATTAGA ATCGTCCATC
AATAGCGCGA CCAATAATGG CATTGTTGGT ACCGGAGCGG GCAGTTTCCC CTATCCTTAT
GGATTGCGCT ACTTCTATGA TGGTAAGCGA ATTAAAGGCC AGCGGATCAC CCAGATTGAT
ATCTACAAGC AGGATCAATG GCAAACTCTT GAATCCAATA AACTGTATAT TGGTGTATCA
AGTGCTTATA CCGCTGCGGG TAAGGAAGGA TATGATGCAC TATTGCATGC TCACTGGCAG
CAACCGATGA GCAATCAAAC ACTCCCTGAA GCTTTTATCG ATTTTGTTAG CCAGCATGGA
CATCTCATTA CGGGACAACT GTTTGCAAAT GTACATTATA TTAGCCACCG CGACTAA
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| Protein sequence | MSHIYRLSIA HINDTHSNFE PSPVQFSLTA QQHTYTLEGH SGGYARLGYQ IEQARQQAAA
ELTPFLFLHG GDSFQGTLYF REFQGAANAH LLNLLKPDAM VLGNHEIDAG NSPVQAFLNR
IDFPVLAGNM DLSAEDRHKT GRLYGHPMLY DFDDSTRTAK VLIKPFHDTQ MAIIGITLDQ
MHLIARPDPD THFVNAIDTT RKTVQKLKQQ GINHIIVLSH LGLDQDQELA ASVDGISLIV
GGHSHTLQGS MSNIGLSDIP YAETINSTPI LHAGKYAETL GLAQINFDSN GKVTELIGNN
YFMLDDNIQV STKDGQPADS AIAADLIEQL FTHPSIKGAQ HDDAIHQVIH SQYRPSLDAL
ENQILAHIPR NFVHTRLPSK QLPHGSEIAP WVSRSMYKAA KYIEPNIDFA LHNAGGVRQS
LNKGQLSLAD VVGRILPFEL PLTLYQIMGK HIIEALESSI NSATNNGIVG TGAGSFPYPY
GLRYFYDGKR IKGQRITQID IYKQDQWQTL ESNKLYIGVS SAYTAAGKEG YDALLHAHWQ
QPMSNQTLPE AFIDFVSQHG HLITGQLFAN VHYISHRD
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