Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1095 |
Symbol | |
ID | 4277629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1294245 |
End bp | 1294679 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638133869 |
Product | cyclase/dehydrase |
Protein accession | YP_749786 |
Protein GI | 114562273 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.157987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAGA TTTCCAAAAG TATGCTGGTT AGATTTAGTG CCTTACAGAT GTATGATTTA GTCAATGATG TTGAATCGTA TCATGCTTTT CTACCGGGCT GTGTCGGTGG TAAGGTGCTT GAGTTTGATG GTCAAACCAT GGTGGCATCG GTTGATGTCA GTAAGGCGGG GATCAGTAAA ACATTTACCA CCCGCAACCA AGTGATCCAA GCTAAATCGA TTTCACTTGA ATTGGAAAAT GGCCCGTTTA AGCACATGCA TGGCTTGTGG AAATTTACTG AGCTGACTGA AGATGCCTGT AAAGTTGAAT TTGATTTGGA CTTTGAATTT TCAAACATGC TGGTTGATAT GGCGTTTGGT AAAGTGTTTA AGGATTTGAT GTCGTCGATG GTAATGGCAT TTACCGATAG GGCAAAGGTG ATTTATCGTG ATTAA
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Protein sequence | MPKISKSMLV RFSALQMYDL VNDVESYHAF LPGCVGGKVL EFDGQTMVAS VDVSKAGISK TFTTRNQVIQ AKSISLELEN GPFKHMHGLW KFTELTEDAC KVEFDLDFEF SNMLVDMAFG KVFKDLMSSM VMAFTDRAKV IYRD
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