| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1066 |
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| Symbol | |
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| ID | 4277828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1258640 |
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| End bp | 1260418 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133840 |
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| Product | oxaloacetate decarboxylase |
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| Protein accession | YP_749757 |
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| Protein GI | 114562244 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
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| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC CGTTAGCATT AACCGATGTC GTCCTGCGTG ACGCACACCA ATCATTATTG
GCAACACGTT TACGTATTGA CGATATGTTA CCCATCGCAC CGTTATTAGA CAAAGTCGGA
TTCTGGTCAC TCGAGTCTTG GGGGGGCGCT ACTTTTGATT CATGCATTCG ATATTTAGGC
GAAGATCCAT GGGATCGTAT TCGCGAATTG AAAAAAGCCA TGCCTAATAC TCCGCAACAA
ATGTTGCTTC GAGGTCAGAA TTTATTGGGT TATAGACATT ATGCCGATGA TGTCGTTACG
CGTTTTGTTG AACGAGCTCA TACCAATGGC GTTGATGTAT TTCGTATCTT CGATGCAATG
AACGATGTAC GTAACCTTGA AACAGCGGTT AAAGCGGTTA AAAACGTGGG CGGCCACGCC
CAAGGTACCA TTTCATTTAC CACTAGCCCT GTTCACAACG TTGATACTTG GGTTGATATG
GCTAAACGCC TAGAAGACAT GGGCGCAGAC TCTTTATGTA TTAAAGATAT GGCGGGTTTA
CTTAAGCCAA TGCAAGCTTA CGACCTTATT AGTCGATTAA AATCACAAAC GGATTTAATG
GTGTCAATGC ATTGTCATGC CACAACGGGC CTAAGCAACG CTACATATCA AAAAGCGATT
GAAGCGGGTG TTGATGTGCT TGATACCGCA ATATCCTCAA TGAGCCAAAC CTACGGCCAC
AGCGCTACCG AAACGTTAGT CGCAATGGTT GAAGATACCG ACAGAGCAAC AGGTTACGAT
ATGGTGTTGC TAGAAGAAAT AGCAGCCTAT TTTCGTGAAG TACGTAAAAA ATACGTCCGT
TTTGAAGGTG CATTGAAGGG CATTGATTCA CGTATTTTAC GTGCTCAAGT ACCTGGTGGC
ATGCTAACCA ATATGGAAAA TCAATTAAAA GAGCAGGGCG CAGCAGACAA AATGGATGCC
GTGCTTGAAG AGATCCCACG GGTACGCGCA GATCTTGGCT TCTTACCTTT AGTTACGCCT
ACCTCGCAAA TTGTAGGTTC ACAGTCAGTG ATCAACGTGC TGATGGGTGA GCGTTACAAG
TCGATGACCA AAGAGACCGA AGGCGTACTA AAAGGCGAAT ATGGTGCGAC GCCAGCACCT
GTTAATGCCG AACTACAAGC CCGAGTGTTA AAAGGCGAGC AGCCTATTAC GTGTCGTCCA
GCCGATTTAA TTGCACCAGA ACTTGATAAA TTACGTGTAG AGCTTGCAGA AGCAGCCAAA
GAGCAGGGCT TTAGCTTAGC TGCAGAACAA GATGACGATG TAATGACTTA CGCGTTATTC
AATCAAATTG GTCTTAAGTT TCTTAAAAAT CGCGGTAATC CGGATGCGTT TGAACCTGTC
CCAAGTGCAG ATGATTTACA AGTGAAAGTC GATAAAGGCC CACAAACCTA TACCGTCGAT
GTCGATGGTC AACATTTTGT GGTCGAAGTG AGTGAAGGTG GTGAGATCGG CCATATCGCG
CCAGCATCAG CAGCACCTAT TGTGGCAGCG TCTGCAACGG TCGCCTCAGC GCCAACGGGT
GAGATTAAAT GCACCATGGC CGCGCCGTTA TCGGGCAATA TTTTCAAAGT ATTAGTCAAT
AATGGTCAAG CGGTTAAAAC AGGTGAAGTG ATCATCATCC TCGAAGCCAT GAAAATGGAA
ACCGAAATTC GTGCTCAACA AGATGGTGTT GTAACTCAGT TAGCGGTTAA GCAGGGTGAC
AGTGTAACTG TAGGTTCAAC ATTGTTATCA CTAGCATAA
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| Protein sequence | MSKPLALTDV VLRDAHQSLL ATRLRIDDML PIAPLLDKVG FWSLESWGGA TFDSCIRYLG
EDPWDRIREL KKAMPNTPQQ MLLRGQNLLG YRHYADDVVT RFVERAHTNG VDVFRIFDAM
NDVRNLETAV KAVKNVGGHA QGTISFTTSP VHNVDTWVDM AKRLEDMGAD SLCIKDMAGL
LKPMQAYDLI SRLKSQTDLM VSMHCHATTG LSNATYQKAI EAGVDVLDTA ISSMSQTYGH
SATETLVAMV EDTDRATGYD MVLLEEIAAY FREVRKKYVR FEGALKGIDS RILRAQVPGG
MLTNMENQLK EQGAADKMDA VLEEIPRVRA DLGFLPLVTP TSQIVGSQSV INVLMGERYK
SMTKETEGVL KGEYGATPAP VNAELQARVL KGEQPITCRP ADLIAPELDK LRVELAEAAK
EQGFSLAAEQ DDDVMTYALF NQIGLKFLKN RGNPDAFEPV PSADDLQVKV DKGPQTYTVD
VDGQHFVVEV SEGGEIGHIA PASAAPIVAA SATVASAPTG EIKCTMAAPL SGNIFKVLVN
NGQAVKTGEV IIILEAMKME TEIRAQQDGV VTQLAVKQGD SVTVGSTLLS LA
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