| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1036 |
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| Symbol | |
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| ID | 4277850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1220964 |
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| End bp | 1221623 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133804 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_749727 |
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| Protein GI | 114562214 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00015592 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACTG GAATAATCGA AGCCCTTGGC ACATTACGTA AAATTGATCG TAAAGGTAAC
GATATCCGCT TAACGGTTGC CAGTGGTAAG TTGGATTTAA CCGACGTAAA GCTAGGTGAT
AGTATTGCAA CCAATGGCGT GTGTTTGACC GTTGTTGAGC GTTTAGGTGA TGGTTACGTT
GCTGATATAT CGGCAGAAAC CGTTGACTTA ACGGGCTTTA GTCATTATCA AGTAGGCCAA
AAGGTTAATC TAGAGAAAGC GGTGACGGCA ACCACTCGAT TGGGTGGACA CATGGTGAGT
GGACACGTTG ATGGCATTGC CAAAGTTGAA CAATGCGCTT ACAGAGGCAA GGCACTCGAG
TTTTGGTTAT CGGTACCAGC TCAATTAAGT CGCTATATTG CTCACAAAGG CTCGATCACT
ATCGATGGCG TTAGTCTGAC CGTGAATGAA GTTGATGGTG CTCGTTTTAG ATTAACGATT
GTGCCTCACA CTGCTGGTGA AACCACGCTG GTGGATTTAA AAGTAGGTGA TAGTGTCAAT
ATCGAAGTCG ATTTAATCGC GCGCTATTTA GAGCGTTTAA TGCAACCGGA GGCTAACCAT
GTGCAGCCTT CATCGGGCGT GACCATGGAG TTACTCGCTA AATCAGGTTT TTTACGTTAA
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| Protein sequence | MFTGIIEALG TLRKIDRKGN DIRLTVASGK LDLTDVKLGD SIATNGVCLT VVERLGDGYV
ADISAETVDL TGFSHYQVGQ KVNLEKAVTA TTRLGGHMVS GHVDGIAKVE QCAYRGKALE
FWLSVPAQLS RYIAHKGSIT IDGVSLTVNE VDGARFRLTI VPHTAGETTL VDLKVGDSVN
IEVDLIARYL ERLMQPEANH VQPSSGVTME LLAKSGFLR
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