Gene Sfri_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1011 
Symbol 
ID4277126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1184464 
End bp1184829 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content40% 
IMG OID638133779 
Producttype IV pilus assembly PilZ 
Protein accessionYP_749702 
Protein GI114562189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACA GACGTAAGTT TTCTCGTATT TTTTTTGCAG CCAGTGCTCA TCTTGCGCAA 
ACAGAACAAA CTTGGCGCAC TAAAATTTTA GATTTAAGTC TTAATGGTGC ACTAGTAGAA
TTGCCATCTG GGTATACAGG TCAGCTCAAT AGCATTTTAA CCTTAGAGTT TGTGTTACCC
GACTCTGACG TTGAGCTGAA AATGGAAGCG GCAATTGTCC ATAAAACCCC AGAACACCTT
GGCTTAAAGT GTACTCACAT TGATGTTGAC AGCATTACCC ATCTTCGCCG AATTATTGAA
TTGAATATGG GTGATCCAGA GCTATTAAAT CGTGAGTTGA CCTCTTTAAT CACTTCAGCG
CCTTAA
 
Protein sequence
MDDRRKFSRI FFAASAHLAQ TEQTWRTKIL DLSLNGALVE LPSGYTGQLN SILTLEFVLP 
DSDVELKMEA AIVHKTPEHL GLKCTHIDVD SITHLRRIIE LNMGDPELLN RELTSLITSA
P