| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0983 |
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| Symbol | |
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| ID | 4278200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1147902 |
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| End bp | 1149875 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133749 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_749674 |
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| Protein GI | 114562161 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000296667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTGACA TGGCTAAAAA TTTAATACTC TGGGTTGTCA TCGCTGTTGT GCTGATGTCA
GTGTTCCAGG GTTATTCCCC CTCTTCTTCG AATTCGCAGA AGATGGATTA TTCCGCCTTT
TTGGACAATG TTCGAAATGG TCAAGTTAAC AAGGTCGAAA TAAAAAGCGA CCAACGAACT
ATTGAAGGAA CTAAACGTAC CGGCGAGAAG TTCACCACCA TCATGCCTAT GTATGATCAA
GACTTAATCA ATGATCTTCA AACTAAAGGT ATTGACTATA AAGGCCAAGA AGCTGAAGAA
TCTGGTTTCT TAACTCAAAT CTTTATTTCA TGGTTCCCAA TGTTACTGCT GATTGGAGTA
TGGATATTCT TCATGCGTCA AATGCAAGGT GGTGGCGGTA AGGGCGCAAT GTCATTTGGT
AAGAGTAAAG CCAAATTGAT GAGCGAAGAT CAAATTAAGA CCACTTTTGC AGATGTCGCT
GGTTGTGATG AAGCAAAAGA AGAAGTAAAA GAACTGGTTG ATTATTTGCG TGACCCTACT
AAATTCCAAA AATTAGGCGG CCGTATTCCT ACTGGCGTAT TAATGGTTGG ACAGCCAGGT
ACAGGTAAAA CCTTACTAGC GAAGGCTATT GCTGGTGAAT CTAAGGTGCC ATTCTTTACC
ATTTCAGGTT CTGATTTTGT GGAAATGTTT GTCGGTGTTG GTGCATCTCG TGTGCGTGAC
ATGTTTGAAC AAGCTAAAAA ATCTTCACCT TGTATCATCT TTATCGATGA AATTGATGCT
GTAGGTCGCC AACGTGGCGC AGGTGTCGGT GGTGGTCACG ATGAACGTGA GCAAACATTA
AACCAGTTAT TGGTTGAGAT GGATGGTTTC GAAGGTAATG AAGGCGTTAT TGTCATTGCG
GCAACTAACC GTCCAGACGT ACTCGATTCT GCACTACTTC GCCCAGGTCG ATTTGACCGC
CAAGTCGTTG TCGGTTTACC AGATGTGCGT GGTCGTGAAC AAATCCTTAA AGTACACATG
CGTAAAGTGC CTTTATCAGA CGATGTTAAA GCAAGTGTTA TTGCTCGTGG TACCCCAGGA
TTTTCTGGTG CAGACTTAGC AAACCTTGTT AACGAAGCAG CGTTGTTTGC TGCTCGTGGT
AATCGTCGTG TAGTCGGTAT GGAAGAGTTT GAACGTGCTA AAGACAAAAT CATGATGGGT
GCTGAGCGCC GTTCTATGGT GATGTCTGAA GAAGACAAAG AGATGACGGC TTATCATGAA
GCCGGACATG CTATTGTTGG TTGCTTAGTG CCAGAGCATG ACCCTGTACA TAAAGTGACA
ATTATTCCGC GCGGTCGTGC TTTAGGTGTG ACGTTCTTCT TACCAGAAGC TGATGCCGTG
AGTCAAAGCC GTCGCAAATT GGAATCACAG ATTTCAGTTG CTTACGGTGG ACGTTTAGCC
GAAGAGCTTA TTTACGGAAG TGAACGAGTC TCTACAGGGG CTTCACAAGA CATTAAATAC
GCGACATCGA TTGCACGTAA CATGGTTACG CAATGGGGCT TCTCTGACAA ATTGGGTCCT
TTACTCTATG CCGAAGAAGA AAACGAAGTT TTCTTAGGTC GCAGTATGGG TAAATCAAAG
GCTATGTCAG GTGATACTGC GTCATTAATT GATTCAGAAA TCAAAATGTT TATCGATAAA
AACTATCAAC GTGCACAAAA CATGCTGACA GAAAATATGG ATATTTTACA TGCGATGAAA
GACGCACTGA TGAAGTATGA AACGATTGAT TCGTTACAAA TTGATGATTT AATGCACCGC
CGTGAAGTGC GTATGCCTGC TGAATGGCAA AAAGATGAAT CATCTGACGA TAAAGATAAT
GGCAATAGCA CGCCTAAATC TGAAGTTGAA ACGCCAGTAG ATGAAGCTAA AACCGACACT
AAAGTCGATA ATAAAGCCGA TACTAATGAT GCGGATGAAT CACCAGCTAA ATAA
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| Protein sequence | MSDMAKNLIL WVVIAVVLMS VFQGYSPSSS NSQKMDYSAF LDNVRNGQVN KVEIKSDQRT
IEGTKRTGEK FTTIMPMYDQ DLINDLQTKG IDYKGQEAEE SGFLTQIFIS WFPMLLLIGV
WIFFMRQMQG GGGKGAMSFG KSKAKLMSED QIKTTFADVA GCDEAKEEVK ELVDYLRDPT
KFQKLGGRIP TGVLMVGQPG TGKTLLAKAI AGESKVPFFT ISGSDFVEMF VGVGASRVRD
MFEQAKKSSP CIIFIDEIDA VGRQRGAGVG GGHDEREQTL NQLLVEMDGF EGNEGVIVIA
ATNRPDVLDS ALLRPGRFDR QVVVGLPDVR GREQILKVHM RKVPLSDDVK ASVIARGTPG
FSGADLANLV NEAALFAARG NRRVVGMEEF ERAKDKIMMG AERRSMVMSE EDKEMTAYHE
AGHAIVGCLV PEHDPVHKVT IIPRGRALGV TFFLPEADAV SQSRRKLESQ ISVAYGGRLA
EELIYGSERV STGASQDIKY ATSIARNMVT QWGFSDKLGP LLYAEEENEV FLGRSMGKSK
AMSGDTASLI DSEIKMFIDK NYQRAQNMLT ENMDILHAMK DALMKYETID SLQIDDLMHR
REVRMPAEWQ KDESSDDKDN GNSTPKSEVE TPVDEAKTDT KVDNKADTND ADESPAK
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