Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0970 |
Symbol | |
ID | 4277768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1132539 |
End bp | 1133669 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638133736 |
Product | chaperone protein DnaJ |
Protein accession | YP_749661 |
Protein GI | 114562148 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0103271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAGC GTGATTATTA CGAAGTTCTC GGTGTTGGAC GTGACACCAG TGAACGCGAA ATTAAAAAAG CGTACAAACG CTTAGCGATG AAGTTTCACC CAGACCGTAA TCCGGGTGAC AAAGCCGCAG AAGCTAGCTT TAAAGAAATT AAAGAAGCGT ACGAAATTTT AACCGACAGC GACAAAAAAG CGGCTTATGA TCAATTTGGT CATGCTGGCG TTGACCCTAA TCGTGGTGGA CACGGTGGTG GCCAAGGTGA TTTTGGCGAT ATCTTTGGTG ATGTATTCGG TGATATTTTT GGTGGTGGTC GCCGTGGTGG TGGTCAACGC CAAGCTGCGC GCGGTAGTGA TTTACGATAC AACCTTGAAT TGTCTTTAGA AGAAGCCGTA CGCGGGTTAA CCAAAGAACT GCGAATTCCT ACTTTAGCAG CGTGTGATTT GTGTGACGGT AGCGGCGCTA AAAAAGGCAC ATCTGCAACC ACATGTGGTA CGTGTCATGG CCAAGGCCAA GTGCAAATGC GTCAAGGTTT CTTTGCTGTT CAGCAAGCGT GTCCTACTTG TCATGGTCGC GGTAAAATCA TTAAAGATCC TTGCGGCAAG TGTCATGGCG AAGGTCGGGT TGAGAAAAGC AAAACCTTAT CAGTTAAAAT TCCTGCTGGT GTAGATACAG GCGATCGTAT CCGTCTTACT GGCGAAGGTG AAGCGGGCGA GTTTGGTGCT CCACCAGGTG ATTTATACGT TCAAGTTAGT GTGCGTGAAC ACGCTATCTT TACTCGTGAT GCCAATAACC TTTACTGTGA AGTACCTATT TCATTCAGTA AAGCAGCATT AGGCGGCGAG ATTGAAGTAC CGACATTAGA CGGTAAAGTT AGCCTTAAAA TCCCAACAGA AACCCAAACT GGGCGCATGT TCCGCCTACG AGGCAAAGGG GTTAAGTCGG TCCGTAGCCA TGCAGTAGGT GACTTACTGT GTAAAGTGGT GATGGAAACA CCGGTTAACT TGAATGAAAA ACAAAAAGAG TTATTGCGTG AGTTTGAAGC AACATTAACT GGCGAATCAA AAAAACACAG CCCTAAAGCT GAAGGTTTCT TTGATGGCGT TAAAAAGTTC TTTCAGGATT TAAACAGTTA A
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Protein sequence | MSKRDYYEVL GVGRDTSERE IKKAYKRLAM KFHPDRNPGD KAAEASFKEI KEAYEILTDS DKKAAYDQFG HAGVDPNRGG HGGGQGDFGD IFGDVFGDIF GGGRRGGGQR QAARGSDLRY NLELSLEEAV RGLTKELRIP TLAACDLCDG SGAKKGTSAT TCGTCHGQGQ VQMRQGFFAV QQACPTCHGR GKIIKDPCGK CHGEGRVEKS KTLSVKIPAG VDTGDRIRLT GEGEAGEFGA PPGDLYVQVS VREHAIFTRD ANNLYCEVPI SFSKAALGGE IEVPTLDGKV SLKIPTETQT GRMFRLRGKG VKSVRSHAVG DLLCKVVMET PVNLNEKQKE LLREFEATLT GESKKHSPKA EGFFDGVKKF FQDLNS
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