Gene Sfri_0969 details

Gene Information

• Locus tag: Sfri_0969
• Symbol: dnaK
• ID: 4277767
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1130511
• End bp: 1132427
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638133735
• Product: molecular chaperone DnaK
• Protein accession: YP_749660
• Protein GI: 114562147
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.291129
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAAAA TTATTGGTAT CGATTTAGGC ACAACAAACT CGTGTGTAGC AGTCCTTGAT 
GGCGGCAAAG CACGCGTAAT TGAAAACGCA GAGGGTGATC GTACAACCCC ATCAATTATC 
GCTTATACCG ATGATGAAAT TATTGTAGGC CAACCAGCAA AGCGTCAAGC TGTAACTAAC 
CCAACAAACA CATTCTTTGC CATTAAGCGT TTAATCGGCC GTCGTTTTAA AGATGACGAA 
GTACAACGTG ACGTGAACAT CATGCCATTC AAAATTATCG GAGCTGATAA TGGTGATGCA 
TGGGTTGAAT CTCGTGGTAA TAAAATGGCA CCACCACAAG TTTCAGCTGA AATCTTGAAA 
AAGATGAAAA AGACTGCTGA AGACTTTTTA GGTGAAGAAG TGACTGAAGC GGTTATTACC 
GTTCCTGCTT ACTTTAACGA TTCACAACGT CAAGCAACGA AAGATGCTGG TCGTATCGCA 
GGTCTTGATG TTAAGCGTAT TATCAACGAA CCTACTGCTG CTGCACTTGC ATACGGTATC 
GATAAGAAGC AAGGCGACAA TATTGTTGCA GTATACGATT TAGGTGGTGG TACATTCGAT 
ATCTCTATCA TCGAAATCGA CAGTAACGAT GGCGACCAAA CATTTGAAGT ACTAGCAACC 
AATGGTGATA CTCACTTAGG TGGTGAAGAC TTTGATAACC GTATGATTAA CTATTTAGCT 
GATGAATTCA AAAAAGACCA GGGCTTAGAT CTTCGTAGAG ATCCTTTAGC AATGCAACGT 
TTGAAAGAAG CGGCTGAAAA AGCAAAAATC GAGCTTTCAA GCACTAACCA CACTGAAGTT 
AACTTGCCTT ACATCACTGC TGATGCATCA GGTCCTAAGC ATTTAGTGGT TAAAATTACT 
CGTGCTAAGT TAGAGTCATT AGTTGAAGAT TTAATTCAAC GTACTTTAGA GCCGCTTAAA 
GTTGCACTAG CTGATGCTGA TTTATCAATA TCTGATATCA ATGAAGTGAT TCTTGTTGGT 
GGCCAGACTC GTATGCCTAA AGTACAAGAA GCAGTAACTA ACTTCTTCGG CAAAGAGCCT 
CGTAAAGATG TTAACCCTGA TGAAGCGGTT GCAGTTGGCG CGGCGATTCA GGCTGGCGTA 
CTTTCTGGCG AAGTGAAAGA CGTACTTCTA CTTGACGTTA CACCACTATC TCTTGGTATT 
GAAACCATGG GCAGTGTGAT GACCAAGCTT ATCGAGAAGA ACACCACTAT CCCGACTAAA 
GCTCAGCAAG TATTCTCAAC AGCTGACGAC AACCAAAGTG CAGTGACAAT TCACGTACTT 
CAAGGTGAGC GTAAGCAAGC TAGTGCCAAC AAGTCATTAG GTCAATTTAA CCTAGAAGGT 
ATTGAGCCAG CACCACGTGG CCAACCACAG GTTGAAGTGA TGTTCGACAT TGATGCTGAT 
GGTATCTTAC ATGTGTCTGC AACAGACAAG AAAACAGGTA AGAAACAAAA TATTACTATC 
AAAGCTTCTT CAGGTTTGTC TGATGAAGAA GTTGAACAAA TGGTACGTGA TGCAGAAGCT 
CATGCTGATG AAGATGCGAA ATTTGAAGAG TTAGTTCAAG CGCGTAATCA AGCAGATGGT 
TTAGCTCATT CAACTAAAAA ACAAGTTGAA GAAGCTGGCG ATGCACTAGC TAGCGACGAA 
AAAGAAAAGA TTGAAGCGGC AATTGCAACT TTAGAAACTG CCATAAAAGG CAAAGATAAA 
GAAGCTATTG ATACAGCTAC TCAAGCGTTA ATCGAAGCGT CTGCTAAGTT AATGGAAATT 
GCTCAAGCTA AAGCTCAAGG TGAAGCAGAA GGTCAAGCAC ACGATGCTGG CCAAGAAAAG 
CCTGCTGATG ATGTTGTTGA TGCTGAGTTC GAAGAAGTTA AAGACGACAA AAAGTAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVLD GGKARVIENA EGDRTTPSII AYTDDEIIVG QPAKRQAVTN 
PTNTFFAIKR LIGRRFKDDE VQRDVNIMPF KIIGADNGDA WVESRGNKMA PPQVSAEILK 
KMKKTAEDFL GEEVTEAVIT VPAYFNDSQR QATKDAGRIA GLDVKRIINE PTAAALAYGI 
DKKQGDNIVA VYDLGGGTFD ISIIEIDSND GDQTFEVLAT NGDTHLGGED FDNRMINYLA 
DEFKKDQGLD LRRDPLAMQR LKEAAEKAKI ELSSTNHTEV NLPYITADAS GPKHLVVKIT 
RAKLESLVED LIQRTLEPLK VALADADLSI SDINEVILVG GQTRMPKVQE AVTNFFGKEP 
RKDVNPDEAV AVGAAIQAGV LSGEVKDVLL LDVTPLSLGI ETMGSVMTKL IEKNTTIPTK 
AQQVFSTADD NQSAVTIHVL QGERKQASAN KSLGQFNLEG IEPAPRGQPQ VEVMFDIDAD 
GILHVSATDK KTGKKQNITI KASSGLSDEE VEQMVRDAEA HADEDAKFEE LVQARNQADG 
LAHSTKKQVE EAGDALASDE KEKIEAAIAT LETAIKGKDK EAIDTATQAL IEASAKLMEI 
AQAKAQGEAE GQAHDAGQEK PADDVVDAEF EEVKDDKK