Gene Sfri_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0936 
Symbol 
ID4277349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp1096751 
End bp1097371 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content41% 
IMG OID638133702 
Producttranscriptional regulator, TetR family protein 
Protein accessionYP_749627 
Protein GI114562114 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCATA GATTAAAAAG GCATGTTGAC TCAATGAGCA GTAAATCGAT TGTGACCACC 
GATAAAAAAC AAGCCATTTT ACATTCGGCT TTACAGTTGT TTGTTAACAA AGGCTTCAAT 
GCGACATCGA CTGCATCGAT AGCCAAAGCG GCTGGTGTGG CAACGGGCAC GTTGTTTCAT 
CATTTCCCGA CAAAAAAAGA CATCATGAAT CAGCTTTTTT TATCCATTAA ACAAGAGTTT 
GCTACCAACA TGGTGAGCAG CACAGATTTT AGTGGCGATA TCGAACGAGA TGCCAATACG 
TTATGGCAAA AAGCCATCGA CTGGGCCATT GCACAACCCT TAAAGCAACT TTTTTTTCTA 
CAATACTCTA TGTCAGCAGA CATTGATGCT GACGTCAGGA AGCAAGCAAT GAATAGCATT 
CTTGGATTTG TTGTCGAATT GATTACTCAA GGTAAACAGC AACAAATTAT CGCTGATATC 
CCCAATGCCT TATTGCTCGA AAATTGCCAT GGTCAGTATT TAGCTGCGAT TCGTTTTTTT 
ACCGACAACC CGCATTTAGG TGATGACGAG ATACACAGAA AAGCCAGTTT CAGACTATTT 
TGGCAGGCAA TGAAAGCGTA A
 
Protein sequence
MDHRLKRHVD SMSSKSIVTT DKKQAILHSA LQLFVNKGFN ATSTASIAKA AGVATGTLFH 
HFPTKKDIMN QLFLSIKQEF ATNMVSSTDF SGDIERDANT LWQKAIDWAI AQPLKQLFFL 
QYSMSADIDA DVRKQAMNSI LGFVVELITQ GKQQQIIADI PNALLLENCH GQYLAAIRFF 
TDNPHLGDDE IHRKASFRLF WQAMKA