Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0920 |
Symbol | |
ID | 4278624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1083338 |
End bp | 1084093 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638133686 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_749611 |
Protein GI | 114562098 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TGGTGTTAGT TACTGGCGGT AGTCGTGGTT TAGGCAAGAA TGCCGCATTA ATGTTGGCGG CTAAAGGCAT GGATGTGGTG ATTACATATT TACATAACAA GGAGGCTGCA GATGAGGTTG TCGCCAGCAT ACGTTGGTTA GGGCAAAAAG CCGCAGCATT ACCGCTGAAT GTTGGCGATG TTTCCATGTT TGGGTCATTT ACAGATGAGC TCTCTGAGTT ACTAAGCCAA TATTTTGAAC GCGAGAATAT TGATGCATTG ATTAACAACG CGGGAATGGG TGAGTTCGCT GCATTTGCAG ACACAACTGA AGCTCAGTTT GATGGGTTAA TGAATGTGCA TTTAAAGGGA GCTTTTTTTC TAACTCAATC GTTACTTCCT TTGGTCAATA ATGGTGGAAA AGTGATTAAT GTGAGTTCTG GGTTAACACG TTTTAGTGAA ACGGGGTTCT GTGCTTATGC CATGATGAAA GCGGGTGTTG AAGTGATGAC CCGCTATTTA GCTTTAGAGC TTGGGCCTCG TCAGATAAGC GTCAATACCT TAGCTCCAGG GGCAATAGAA ACCGATTTTG GTGGTGGCGT TGTGCGTGAT AATACTGCCC TAAATGAGTC TATCGCATCA AAAACGGCAC TTGGGCGTGT TGGTTTGCCG GATGATATTG GTAAGGCGAT GTTGATGTTA TTAAGCGACG AAGCGCAGTG GTTAAATGGT CAGAGAATTG AAGTGTCTGG AGGAATTCAT TTGTAA
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Protein sequence | MNKLVLVTGG SRGLGKNAAL MLAAKGMDVV ITYLHNKEAA DEVVASIRWL GQKAAALPLN VGDVSMFGSF TDELSELLSQ YFERENIDAL INNAGMGEFA AFADTTEAQF DGLMNVHLKG AFFLTQSLLP LVNNGGKVIN VSSGLTRFSE TGFCAYAMMK AGVEVMTRYL ALELGPRQIS VNTLAPGAIE TDFGGGVVRD NTALNESIAS KTALGRVGLP DDIGKAMLML LSDEAQWLNG QRIEVSGGIH L
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