Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0874 |
Symbol | |
ID | 4278631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1029253 |
End bp | 1030062 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133640 |
Product | ABC transporter related |
Protein accession | YP_749565 |
Protein GI | 114562052 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAT CTGTATTAGA TGTAAATCAT CTTTTTTGGC AAGTCGATAA TAAAACGATT CTGGCGGACA TTCATTTCAG TTTGCCTAAA GGTCAAATGC TAGGGTTAAT AGGCCCAAAT GGTGCAGGAA AGTCGAGCCT GTTGCGCTGC TTGTATCGTT ATATTGTGCC AACCAGTGGC GATATTGAGA TATTTTCTAA ACCCATCAGT GAGTATTCCT CTAAGTTGTT AGCGCAGAAT ATTGCTGTGG TGCAACAAGA TACCCCGCAC TATTTTGACA TGACTACCGA GCAGTTAGTG GCGATGGGGC TTACTCCGCA TAAAGGCTTA TTTGACTCAA ACACTGCCCA AGACCGTGAA CGTGTGGTGA GTGCCTTAAC CAAAGTTGGA TTGCAGCAAA AAGCCCAACA ACAGTATGAA CTGTTATCTG GTGGTGAAAA ACAACGCGCC CTTATTGCCC GCGCCATTGT GCAACAGCCG CATATTCTAA TTTTAGATGA ACCGACTAAC CACTTAGATA TTCGTTATCA AATTCAAATC CTTGAACTGG TTAAATCATT AGGCATTAGT GTTATTGCTT CTATACACGA TCTGAATTTA GCCAGTGCAA TGTGCGATAA ATTACTGCTA CTCGACCAAG GGCGATTAAT TGCTAAAGGT ACTCCAACAG AAGTGCTAAC CGAACGGCAA ATTAGTGAGG TGTTTGGTGT GTGCTGCGAC ATTAATCTTC ACCCACAACA CGGTAAGCCG CTGATTAGTT ATTTTTATGG TTACCAACCG AGCCCGAAAG GATGCCCCGA TCATGATTGA
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Protein sequence | MSESVLDVNH LFWQVDNKTI LADIHFSLPK GQMLGLIGPN GAGKSSLLRC LYRYIVPTSG DIEIFSKPIS EYSSKLLAQN IAVVQQDTPH YFDMTTEQLV AMGLTPHKGL FDSNTAQDRE RVVSALTKVG LQQKAQQQYE LLSGGEKQRA LIARAIVQQP HILILDEPTN HLDIRYQIQI LELVKSLGIS VIASIHDLNL ASAMCDKLLL LDQGRLIAKG TPTEVLTERQ ISEVFGVCCD INLHPQHGKP LISYFYGYQP SPKGCPDHD
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