Gene Sfri_0803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0803 
Symbol 
ID4277899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp947260 
End bp947706 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content42% 
IMG OID638133571 
Producttranscriptional regulator, MarR family protein 
Protein accessionYP_749496 
Protein GI114561983 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA ACAAACATCT ATTACTCGAA AATCAGTTCT GTTTTGCTGT TTATTCAACG 
TCATTGGCGA TTACCCAACT GTACAAACCA TTACTCGACT CTATCGGGCT AACTTACACC
CAGTATTTGG TGATGTTAGT CCTCTGGGAG CAAGATGGGT TAAGTTTAAA AACCTTAGCC
AGCAAGCTTG GGCAGCAATC TGGTGCATTA ACACCGGTCA TAAAACGGCT CGAAACCGAT
GGCCTGCTAA AGCGCATTCG CGAGCCCTTA GATGAACGGA CCTTGTCCAT GCAATTAACC
GAAAAAGGTC ATCAACTTCA GCCCCAGGCA GAAAAAATCC ATCTATGTAT TCTTGAACAA
TGCGGTATTG AAATGTCTGA ACTCGACGAT CTAAAACAAC AACTGGATCA ATTTAGGCGA
AAACTGCCTA ACCATATTGA GTTCTAA
 
Protein sequence
MNKNKHLLLE NQFCFAVYST SLAITQLYKP LLDSIGLTYT QYLVMLVLWE QDGLSLKTLA 
SKLGQQSGAL TPVIKRLETD GLLKRIREPL DERTLSMQLT EKGHQLQPQA EKIHLCILEQ
CGIEMSELDD LKQQLDQFRR KLPNHIEF