| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0764 |
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| Symbol | |
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| ID | 4277931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 892589 |
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| End bp | 894085 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133533 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_749458 |
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| Protein GI | 114561945 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTACT TAACCTATGT CTCATTAGCA ATATATTTCC TGGTAATGCT AGGCATTGGA
TTGTTCGCGT ATAAACAATC AACAAGCGAT GTATCGGGTT ACATTTTGGG TGGCCGTAAA
GTCAGCCCAC AAGTTACCGC GCTGTCAGCA GGTGCCTCCG ATATGAGTGG CTGGATGCTA
ATGGGCTTAC CTGGGGCTAT GTTCTTGGTT GGCTTTGAAA CCATCTACAT TGCATTAGGT
CTATTAATTG GTGCATTGGT TAATTACCTT GTTGTAGCAC CTAAATTAAG GGTCTATACC
GAAGTTGCAG ATAACTCCCT GACCATTCCT GAGTTTTTTG CTAAGCGCTT CCATGCACCT
AACGGTCATG TGCGTATTAT CGCAGCAGTT ATCATCGTTA TCTTCTTTAC CTTATATACA
TCAGCTGGGC TTGTCGCTGG TGGAAAGTTA TTTGTATCAG CATTTGATTT AAGTTATGAA
CTAGGGTTAA TCGTCACCCT TGCTGTAGTA GTGTCTTATA CCCTACTCGG TGGCTTCTTA
GCCGTAAGTC TGACGGACTT TGTACAAGGC TGTATTATGT TTATTGCCTT AGTTTTAGTA
CCCGTGGTTG CGTATCAAGA GTTTAGTAGC GCAGACAAAA TGATGGGCTT TGCTTATGAG
TCTATTCCGC ATTTTTCTGA TGCGATGCAA AATGTCACTA TGCTCGGGTT AATTTCCAGT
CTTTCTTGGG GATTAGGTTA TTTTGGCCAA CCACATATTA TTGTACGATT TATGGCTATC
CGCTCAGTCT CGGATATCAA AACCGCACGA AGAATTGGCA TGAGCTGGAT GACAGTCACT
ATCGTTGGTG CGCTGGCTAC AGGTCTAGTC GGTATTGCCT ATGCCAACAA ATTTGACATG
AAAGTCAGTG ATCCTGAAAC CATCTTTATT ATATTTTCAG AATTACTGTT TAATCCTTTA
ATCAGTGGTT TCTTGCTTGC AGCTATTTTA GCCGCGATTA TGAGCACCAT ATCTTCACAG
TTATTAGTAT CGTCAAGCTC GCTAACTGAA GATATCTATC GGGTGATTTC AAAGAAAGAA
TCAACGGATA AAGAAATGGT TAAAATGGGC CGTTATGGTG TTGCTGGAGT TGCCATTGTG
GCAAGTTTAC TAGCACTGGA TCGCTCTAAC AGTATTTTAT CGTTAGTGAG TAATGCTTGG
GCAGGATTTG GCGCGGCCTT TGGTCCACTG GTATTGTTTA GTTTATACAA ACAAAATCTC
ACTCATAAAG CCGCTGTAGC TGGTATTGTT TCAGGTGCTG CTACCGTCCT CTTTTGGATA
TATGCTCCTG TGCTTGCCGA CGGAAAAGCA TTAACCAGCG TGGTTTATGA AATGATCCCA
GGCTTTATTG TTAGTAGTGT AGTGATTTGG ATTGCCAGTG CTCTTGACTC GGATCCTTGT
AATAAAACAG TTGATACCTT CCATGAAGCG AATCGTGTTT TAACCGAGCA ACAGTAA
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| Protein sequence | MHYLTYVSLA IYFLVMLGIG LFAYKQSTSD VSGYILGGRK VSPQVTALSA GASDMSGWML
MGLPGAMFLV GFETIYIALG LLIGALVNYL VVAPKLRVYT EVADNSLTIP EFFAKRFHAP
NGHVRIIAAV IIVIFFTLYT SAGLVAGGKL FVSAFDLSYE LGLIVTLAVV VSYTLLGGFL
AVSLTDFVQG CIMFIALVLV PVVAYQEFSS ADKMMGFAYE SIPHFSDAMQ NVTMLGLISS
LSWGLGYFGQ PHIIVRFMAI RSVSDIKTAR RIGMSWMTVT IVGALATGLV GIAYANKFDM
KVSDPETIFI IFSELLFNPL ISGFLLAAIL AAIMSTISSQ LLVSSSSLTE DIYRVISKKE
STDKEMVKMG RYGVAGVAIV ASLLALDRSN SILSLVSNAW AGFGAAFGPL VLFSLYKQNL
THKAAVAGIV SGAATVLFWI YAPVLADGKA LTSVVYEMIP GFIVSSVVIW IASALDSDPC
NKTVDTFHEA NRVLTEQQ
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