Gene Sfri_0745 details

Gene Information

• Locus tag: Sfri_0745
• ID: 4278281
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 874696
• End bp: 875238
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638133515
• Product: hypothetical protein
• Protein accession: YP_749440
• Protein GI: 114561927
• COG category: [S] Function unknown
• COG ID: [COG2128] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00778] alkylhydroperoxidase AhpD family core domain; [TIGR01926] uncharacterized peroxidase-related enzyme

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.680464
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGCAT TTACTATTCA CACTGTAGAC ACAGCACCAG AAGACAGCAA AGCAATGTTA 
GAAGGCGCTA AAAAGCAAAT GGGTATGGTA CCTAATTTAT TTGGTGTGTT GGCAGAATCT 
CCAAGCACGT TGCAAGCTTA CCAACAGTTA CATCAGGCTT TTTTAGACAC ATCATTTAAC 
CCTGAAGAGC TAACGGTTGT ATGGCAAACC ATTAACGTTG AACACGAGTG TGGCTATTGT 
GTACCAGCAC ATACAGGTAT TGCACATTCA ATGAAAGTAG ACCCAGCGTT AACTGAAGCA 
TTACGTAATA AAGCGGCGAT GCCAACTGCA AAATTACAAG CGTTACAAGA TGCGACATTA 
AGTATCGTAC GTAACCGCGG TAACATTTCT GAAGCAGAAC TAGCAGCATT TTATGCCGCA 
GGTTATGGCC AACAGCAGGT GTTAGAAATC ATTTTAGGCT TGTCACAAAA AGTGATCAGT 
AATTACACCA ACCATGTAGC AAAAACACCG GTTGACGATG TATTCAAAAA GTTTGCTTGG 
TAA 

 

Protein sequence

MTAFTIHTVD TAPEDSKAML EGAKKQMGMV PNLFGVLAES PSTLQAYQQL HQAFLDTSFN 
PEELTVVWQT INVEHECGYC VPAHTGIAHS MKVDPALTEA LRNKAAMPTA KLQALQDATL 
SIVRNRGNIS EAELAAFYAA GYGQQQVLEI ILGLSQKVIS NYTNHVAKTP VDDVFKKFAW