| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0735 |
|---|
| Symbol | |
|---|
| ID | 4277642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 861223 |
|---|
| End bp | 861435 |
|---|
| Gene Length | 213 bp |
|---|
| Protein Length | 70 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638133506 |
|---|
| Product | cold-shock DNA-binding domain-containing protein |
|---|
| Protein accession | YP_749431 |
|---|
| Protein GI | 114561918 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAACA AAACAACTGG TTTAGTAAAA TGGTTTAACG AAGATAAAGG TTTTGGTTTT
ATCACTCCTG ATAACGGCGG CGCTGACGTG TTCGTTCATT TCCGTTCAAT CACTTCAGAG
GGTTTCAAGA CTCTTGCTGA AGGCCAGAAA GTTTCTTTTG ATGTTGAGCA AGGCCAAAAA
GGCCCACAAG CTGCTAACGT AGTAGCTGTG TAA
|
|---|
| Protein sequence | MSNKTTGLVK WFNEDKGFGF ITPDNGGADV FVHFRSITSE GFKTLAEGQK VSFDVEQGQK
GPQAANVVAV
|
|---|
| |