Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0717 |
Symbol | |
ID | 4278359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 841979 |
End bp | 843070 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133481 |
Product | GTP-dependent nucleic acid-binding protein EngD |
Protein accession | YP_749413 |
Protein GI | 114561900 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0012] Predicted GTPase, probable translation factor |
TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000164209 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTTA AATGCGGCAT TGTTGGTCTG CCAAACGTAG GTAAGTCAAC GTTGTTTAAT GCGTTAACAC AAGCGGGTAT TGAAGCGGCA AACTTTCCGT TTTGCACTAT TGAGCCAAAC ACGGGTGTGG TACCGGTACC AGATGCACGT CTTGATGCGT TAGCTGCTAT TGTTAAACCT CAACGTATTT TACCTACTTC TATGGAGTTC GTTGATATCG CTGGTCTAGT GGCTGGTGCA TCGAAAGGTG AAGGCTTAGG TAACAAGTTT TTAGCTAACA TTCGTGAAAC TGATGCTATT GGTCACGTAG TACGTTGTTT TGAAGATCCA AACATTGTTC ACGTAGCCAA CAAAATTGAC CCCGCTGGCG ATATTGAAGT CATTAATACT GAGTTAGCTC TAGCAGACTT AGACGCATGC GAACGCGCTA TTTTTCGTCA AGCTAAGCGT GCTAAAGGCG GCGACGGCGA TGCGAAATTT GAAGTCGCAG TACTTGAAAA AATGCGTCCA GTGTTAAACG AAGGCCAAAT GTTGCGTTCG TTGGAATTAA CTAAAGAAGA GTTAGCAGCC GTTGCATACC TTAACTTCTT GACCATTAAA CCCACAATGT ACATTGCTAA CGTTGCTGAC GATGGTTTTG AAAACAACCC TCATTTAGAT GTTGTTCGTG CTATTGCCGC AACAGAAAAT GCTATCGTTG TGCCTGTATG TGCTGCTATT GAGTCTGAAT TAGCTGAAAT GGAAGCTGAT GACCGCGCAG AATTTATGGC TGACCTTGGT TTAGAAGAGT CTGGTTTAGA TCGCGTAATT CGTGCAGGTT ACGAATTACT GAATCTGCAA ACTTACTTTA CTGCAGGTGT AAAAGAAGTT CGCGCATGGA CAGTACCCGT TGGTGCTTCT GCCCCACAAG CTGCTGGTGT TATCCACACT GACTTCGAAC GTGGCTTTAT TCGTGCGCAA GTAATGGCAT ACGAAGACTT TATTACTTAT AAGGGTGAAG CTGGCGCCAA AGATGCGGGT AAATTACGTG TTGAAGGTAA AACTTATGTC GTTAAAGATG GCGATGTAAT GCATTTCTTA TTTAACGTTT AA
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Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTQAGIEAA NFPFCTIEPN TGVVPVPDAR LDALAAIVKP QRILPTSMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI GHVVRCFEDP NIVHVANKID PAGDIEVINT ELALADLDAC ERAIFRQAKR AKGGDGDAKF EVAVLEKMRP VLNEGQMLRS LELTKEELAA VAYLNFLTIK PTMYIANVAD DGFENNPHLD VVRAIAATEN AIVVPVCAAI ESELAEMEAD DRAEFMADLG LEESGLDRVI RAGYELLNLQ TYFTAGVKEV RAWTVPVGAS APQAAGVIHT DFERGFIRAQ VMAYEDFITY KGEAGAKDAG KLRVEGKTYV VKDGDVMHFL FNV
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