Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0697 |
Symbol | |
ID | 4278740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 821978 |
End bp | 822991 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638133461 |
Product | lytic murein transglycosylase B |
Protein accession | YP_749393 |
Protein GI | 114561880 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0681454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAGA TAACCGTTCA AATCGCCAGC TTAGCATTAC TTATTGGTAC TGTTTTTAAC GCAAATGCAG TGACCGAAGC AGACACTCAA GCATTACAGA AAACCTTTAT TGCTGAACAA GTAAAACAAG GATTCAAGCA ACAAGAAGTC GAGCAGTTTT TAGCGTCTTC AAGCTTCGAT CAAACTATTA TTGACGCGAT ATCAAAACCT TGGGAAGCGA AACCTTGGCA CCAATATTAT CCTATTTTCT TGACCGACAA ACGGTTGCAA AAAGGGCTAG AGTTTTGGCA AGAAAACCAG CAAACCATCG ATAAAGCAGC CAAACAATTT AACGTCGATC CACAAATTAT AGTGGCCATT ATTGGCATTG AAACATTCTA TGGTGGTTAC TTAGGCAATT ATCGTGTGCA AGATGCCCTG TATACGTTGG GCTTTCATTA CCCACCACGA GCAACGTTCT TTCGCAGTGA ATATGCCAAT TTAATGTCGT TGATTAAAGA AGAAAAGCTC GATAATGACA CCTTAAAAGG CTCATATGCT GGAGCAATGG GTTATGGTCA ATTCATTCCA TCTAGCTACC GTCATTACGC TGTCGACTTT GATGGCGACG GTCGACGAGA TTTATTAACC AGTAAAGCAG ATGCTATTGG CAGTGTGGCT AACTATTTTC ATCAACACGG TTGGCAAAAA GGTCAGCCTG TGGCGCTATT ACTAAATCAC ACATCAAGCA CAGCCCCAAA AGCGAATGTT TGGACCAAAG AAAAGCTTCA CTACAAGGTA TCAGACATTC TTAGCCCAAC ATTAAGCTTG GCAGATAATC AAGATATTGA TGCATCACAA GCTGCATTGT TAATTAAACT AGATCAAGCT GAAAGCGCTG AATACTGGCT CGGGCTTAAA AACTTTTATG TGATCACTCG CTATAATCGC AGCCCGTTAT ATGCAATGGC AGTTTATCAG TTTAGCCAAC AACTTAATGC CCACCACAAA TCGGTAAATC AACATGGCAA TTAA
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Protein sequence | MTKITVQIAS LALLIGTVFN ANAVTEADTQ ALQKTFIAEQ VKQGFKQQEV EQFLASSSFD QTIIDAISKP WEAKPWHQYY PIFLTDKRLQ KGLEFWQENQ QTIDKAAKQF NVDPQIIVAI IGIETFYGGY LGNYRVQDAL YTLGFHYPPR ATFFRSEYAN LMSLIKEEKL DNDTLKGSYA GAMGYGQFIP SSYRHYAVDF DGDGRRDLLT SKADAIGSVA NYFHQHGWQK GQPVALLLNH TSSTAPKANV WTKEKLHYKV SDILSPTLSL ADNQDIDASQ AALLIKLDQA ESAEYWLGLK NFYVITRYNR SPLYAMAVYQ FSQQLNAHHK SVNQHGN
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