Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0693 |
Symbol | lipB |
ID | 4278736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 818635 |
End bp | 819285 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638133457 |
Product | lipoate-protein ligase B |
Protein accession | YP_749389 |
Protein GI | 114561876 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAAGCAC AAACACTGCA CATCCGCCAT CTTGGTATGC AAGACTATGA ATCGACATGG CATGCAATGC AGGAATATAC TGACACTCGT GATAGCGACA GCCAAGATGA ACTTTGGATT GTTGAGCATC CACCAGTATT TACCCAAGGC CAAGCAGGTA AAAGCGAGCA CATACTCAAC CCTGGTGATA TTCCAGTTAT TCAAGTCGAT CGCGGTGGCC AAGTTACTTA CCACGGTCCA GGACAATTAG TGGTTTATCC ACTTATTGAC ATCAAACGTA ATAAACTAGG TGTTAGACAG TTAGTGAACA ATATTGAGCA AAGTATTATT GATATGCTCG CTTATTACGC TATTAATGCT TACGCAAAAG CCGACGCTCC TGGTGTTTAT GTCACAGAAC AAAAAATTGC CTCTTTAGGG TTACGCATCC GTAAAGGCTG CTCTTTTCAC GGCTTAGCAT TAAATGTCGA TATGGACTTA GCCCCGTTTC AGCGTATCAA TCCTTGCGGA TATGCCGGTT TAGAAATGGT GCAATGTAAA GCATTAGGTG GTCCACAAAC TGTGCTTGAA GCTGGCGATA AATTAATCCA AACCTTTAGC CAAATTATGG GCTATCAACA ACTTGTACAT CATCAAGGAT TAGCAGAATA A
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Protein sequence | MQAQTLHIRH LGMQDYESTW HAMQEYTDTR DSDSQDELWI VEHPPVFTQG QAGKSEHILN PGDIPVIQVD RGGQVTYHGP GQLVVYPLID IKRNKLGVRQ LVNNIEQSII DMLAYYAINA YAKADAPGVY VTEQKIASLG LRIRKGCSFH GLALNVDMDL APFQRINPCG YAGLEMVQCK ALGGPQTVLE AGDKLIQTFS QIMGYQQLVH HQGLAE
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