| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0687 |
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| Symbol | |
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| ID | 4277227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 812668 |
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| End bp | 814029 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133451 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_749383 |
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| Protein GI | 114561870 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGTG TTTTCGATAT TTATAAAGTG GGTATTGGAC CTTCAAGCTC TCATACCGGC
GGACCAATGA AAGCAGGAAA AGAGTTTATC GATGAGTTAC GTTCGAAAGG CAAGCTTCGA
GAAATCACTA GAATTACTGT TGATTTATAT GGCGCACTGT CACTCACAGG AAAGGGTCAC
AACACAGATA TAGCCATTAT TATGGGTCTA GCGGGTAATC TACCGGAAGA TGTCGATATC
GAAAGTATCC CCAGTTTTAT TGCACGGCTG GAGAAAAGTG AAAGGCTTCC TGTAGGCATG
CACTGTCATA CTGTGTCCTT CCCTTATAAT AAAAGCATCC ACTTCCATAA TACAAATTTG
AAACTGCATG AAAATGGCAT GCAAATCCAT GCATGGATAG AAAACGAGAA AGTGCTCTCC
AAGACTTACT ATTCTATCGG AGGCGGATTC ATTGTTGATG AAGAAAATTT CGGCAAACAA
GAGGAACAGT TAGTAAAAGT TCCTTATGAA TATTCTACAG CAGAAGAATT GATTAAACAT
TGTAAAACTG AAGGATTATC GATTAGCTCT TTAGTGTTAG AGAATGAAAA ATCGCTGCGC
CCAGAAGGTA ATATTCAAGC TCAGTTTACT CATATCTGGA AAACGATGCG TGAATCTATG
GATCGCGGTA TGAATACCCA AGGGGTACTA CCAGGACCAA TGCGGATCCC TCGTCGTGCT
GCTGCGCTTT GCCAACAACT TGTGGCTTCT GAATCTACAT CTAATGACCC TATGGCTGTT
ATTGATTGGG TCAATATGTT TGCTTTTGCA GTGAGTGAAG AAAATGCATC TGGAGGCCGA
GTTGTCACAG CACCTACTAA TGGGGCTTGC GGTATTGTCC CAGCAGTAAT TGCTTATTAC
GACAAGTTTA TCCATAGAGT TACCGAGAAA GACTATATGC GTTTTCTGGC GGCATCTGGG
GCTATTGGCG GGTTATTTAA ACAGAATGCT TCCATTTCTG GAGCGGAAGT TGGCTGCCAA
GGAGAGGTTG GAGTCGCCTG TTCAATGGCT GCGGCAGGGC TTGTTGAGTT ATTGGGTGGT
AGTCCTGAAC AAGTATGTAT CGCTGCAGAA ATTGGTATGG AACACAACCT GGGACTGACT
TGCGACCCAG TATCTGGAAG GGTGCAAATA CCTTGCATTG AACGTAATGG AATTAACGCA
GTAAAAGCGA TTAACTCTGC ACGTATGGCA CTACGTCGTT CTTCAGATCC TCTCGTGTCT
CTTGATAAAG TCATCGAAAC AATGATGGAA ACAGGTAAGG ATATGAACTC TAAATATAGA
GAAACCTCTT TGGGTGGATT AGCTATCAAA GTTCTTTGCT GA
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| Protein sequence | MISVFDIYKV GIGPSSSHTG GPMKAGKEFI DELRSKGKLR EITRITVDLY GALSLTGKGH
NTDIAIIMGL AGNLPEDVDI ESIPSFIARL EKSERLPVGM HCHTVSFPYN KSIHFHNTNL
KLHENGMQIH AWIENEKVLS KTYYSIGGGF IVDEENFGKQ EEQLVKVPYE YSTAEELIKH
CKTEGLSISS LVLENEKSLR PEGNIQAQFT HIWKTMRESM DRGMNTQGVL PGPMRIPRRA
AALCQQLVAS ESTSNDPMAV IDWVNMFAFA VSEENASGGR VVTAPTNGAC GIVPAVIAYY
DKFIHRVTEK DYMRFLAASG AIGGLFKQNA SISGAEVGCQ GEVGVACSMA AAGLVELLGG
SPEQVCIAAE IGMEHNLGLT CDPVSGRVQI PCIERNGINA VKAINSARMA LRRSSDPLVS
LDKVIETMME TGKDMNSKYR ETSLGGLAIK VLC
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