| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0683 |
|---|
| Symbol | |
|---|
| ID | 4277224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 809484 |
|---|
| End bp | 810434 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638133448 |
|---|
| Product | L-asparaginases, type II |
|---|
| Protein accession | YP_749380 |
|---|
| Protein GI | 114561867 |
|---|
| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
|---|
| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT CTATACGTAA GCTCTTGCTA TCGGTTACCT TAGGGTTATT TCTATCCTCT
GCGGTGCAAG CGCTTCCACA GGTTCGAATT ATTGCCACCG GTGGGACCAT TGCTGGAGTG
GGCCAATCGG CTACTGAGTC AAATTATCAG TCTGGAGAGG TCGGGGTTAA TAGCTTAATA
GCAGCTGTGC CGGAGATAAA GTTGCTTGCC GAAATTCAAG GTGAACAACT CGTTAAAATT
GGTTCGCAAG ATATGAACGA TAAAGTTTGG TTAGACTTAG CCAAACGGAT TAATATTTTA
CTGGCTGATA AAAATGTCGA TGGAATTGTG ATTATCCATG GCACTGATAC TTTAGAAGAA
ACTGCTTACT TTTTGAATCT AACAGTCAAG AGCGATAAGC CTGTAGTGCT GGTTGGTGCA
ATGCGTCCAT CCACTGCTAT GAGTGCCGAT GGACCTATGA ATCTGTATAA TGCAGTCGCC
ATTGCCGCTA ATCTAGAGTC TAAAGGCAGA GGTGTTTTAG TCGTGATGAA CGATACAGTA
CTTAACGCCC GCGATGTAAC GAAGACTAAT ACTACTGGAG TACACACCTT TGCCGCGCCT
AATTTTGGCC CGCTTGGTAT TATTCATAAC AGTAAGGTTG AGTATATGGG CAGAACGGAA
CGTCAACATA CGACTCAAAC CCCTTTTGAT ATCAGCAAGC TCGATATTTT ACCAAAGGTA
GGTATTGTTT ATAACTACGC TAATGCTAGT GATTTACCTG CTAAAGCTAT GGTTGAAGCG
GAGTTTGACG GCATTATTAG TGCGGGTGTA GGTAACGGCA ACATTTATCA CTCTGTATTC
GATACACTCA TTAAGGCGAG CAAAAAAGGC ATATTGGTTG TCCGCTCTAG CCGTGTACCG
ACCGGTGCCA CTACTCTAGA TTGTAGTGGC ATAGTTATTT TGGCCACCTA A
|
|---|
| Protein sequence | MNFSIRKLLL SVTLGLFLSS AVQALPQVRI IATGGTIAGV GQSATESNYQ SGEVGVNSLI
AAVPEIKLLA EIQGEQLVKI GSQDMNDKVW LDLAKRINIL LADKNVDGIV IIHGTDTLEE
TAYFLNLTVK SDKPVVLVGA MRPSTAMSAD GPMNLYNAVA IAANLESKGR GVLVVMNDTV
LNARDVTKTN TTGVHTFAAP NFGPLGIIHN SKVEYMGRTE RQHTTQTPFD ISKLDILPKV
GIVYNYANAS DLPAKAMVEA EFDGIISAGV GNGNIYHSVF DTLIKASKKG ILVVRSSRVP
TGATTLDCSG IVILAT
|
|---|
| |