| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0678 |
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| Symbol | frdB |
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| ID | 4277219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 802323 |
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| End bp | 803048 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638133443 |
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| Product | fumarate reductase iron-sulfur subunit |
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| Protein accession | YP_749375 |
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| Protein GI | 114561862 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGAA AAATCACCTT TAATATCTTC CGCTACGATC CACAAGATAG CCAAGATAAG
CCAAAAATGG AACGTTACGA ATTAACCGAA ACAGATGGTA TGACAGTGTT TATCGCATTA
AATCAACTCC GTGAACAACA AGATACTTCG TTACAGTTCG ACTTTGTGTG CCGAGCAGGT
ATTTGTGGCA GTTGCGCCAT GGTGATTAAT GGCTTCCCAA CGCTTGCCTG TCGTACCTTA
ACGGCAAATT ACCCTGATGG TGAAATCACC TTAATGCCTC TACCTGGCTT TGAACTGATT
GGTGACTTGT CGGTAAACAC CGGGAAATTT ATGCGTGAAT TAGCCGAGCG ATTAAAGCTC
TGGTTACATC CTAAACCGGA CGATCAAGAC ATGCATCGCC TAGAAAATCC AATGGCACCA
GAAGAAGCCG CGCGGATATA TGAATTGGAA CGCTGTGTCG AATGTGGTGT CTGCGTCTCT
GCATGTGCCA CCAAACAAAT GCGAGACACC TTTGTGGGCG CTGTAGGCAT GATGAAAATT
GCCCGTTTCG AAATGGATAG TAGAGACAAC CGCAGCGCAG ACGACTTCTA CCATGTTATC
GGCAATCAAG ATGGAGTCTT TGGCTGCATG ACGCTGTTAG GTTGCCAAGA TAACTGCCCT
AAAGACTTGC CCCACATGCA GCAAATTGCT TATTTACGCC GAAAAATGGC CTCGACAATT
CTCTAG
|
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| Protein sequence | MSRKITFNIF RYDPQDSQDK PKMERYELTE TDGMTVFIAL NQLREQQDTS LQFDFVCRAG
ICGSCAMVIN GFPTLACRTL TANYPDGEIT LMPLPGFELI GDLSVNTGKF MRELAERLKL
WLHPKPDDQD MHRLENPMAP EEAARIYELE RCVECGVCVS ACATKQMRDT FVGAVGMMKI
ARFEMDSRDN RSADDFYHVI GNQDGVFGCM TLLGCQDNCP KDLPHMQQIA YLRRKMASTI
L
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