| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0663 |
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| Symbol | |
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| ID | 4278184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 773452 |
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| End bp | 774369 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133420 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_749361 |
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| Protein GI | 114561848 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATACCG CTTTGGCCAA ACCTGTTTAT CAACCCGATC CTTTAATTAA CCAGTTTCTT
GATGATTTAT GGTCAACTAA CGGGCTAAGT GATAATACCT TGGTATCTTA TCGTACAGAT
TTACAAAATG CAGAACGTTA CATTTTGACT AAAGGTAAGG ATTTGCTGCA AGTTGACCAG
GCCTTACTGC GTGACTATCT TGCTGAACGT TTTGATAAGC AATTTGCTAA AAGTAGTACA
GCGAGACTTC TCAGTAGTTT ACGGCGTTTT TATGCTTACT TATTAGTTAA GCAGAAAATT
AGCCAAGACC CGACTGCATT AATCAAGTCA CCTAAGCTCG TTCGCCAATT ACCGGATACA
TTGTCTGAAG CGCAAATAGA CAATTTGTTA TCAGAGCCAA ATATTGATGA TCCGATCGAG
CACCGAGATA AAGCCATGTT AGAGCTTTTG TATGCCACAG GGCTGCGGGT GACTGAATTG
GTAAGTTTAA CGATGGAGCA GATTAGTTTG CGCCAAGGTT TAGTGAGGGT GATGGGTAAA
GGAGGCAAAG AGCGTTTGGT CCCTTTAGGT GAACTGGCCA TTACAGCTGT TGAGCAGTAC
ATCAAGTTTG CTCGTGCTGA ACTATTAAGT ATGAAACAGT CTGATGTTTT GTTTCCCTCT
CGCCGTGGGC AAATGATGAC CAGACAAACC TTTTGGCATC GAATTAAATT GTATGCGGCC
AGAGCCGGTA TTCAATGTCA TCTATCTCCA CATACGTTAC GCCATGCTTT TGCTACCCAT
TTACTTAACC ATGGCGCAGA TTTACGTGTG GTACAATTGT TACTCGGTCA CAGTGATTTA
TCGACCACTC AAATTTATAC ACATGTTGCT AAAGTACGCT TACAGCAACT ACATAGCCAA
CATCATCCAC GCGGTTAG
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| Protein sequence | MDTALAKPVY QPDPLINQFL DDLWSTNGLS DNTLVSYRTD LQNAERYILT KGKDLLQVDQ
ALLRDYLAER FDKQFAKSST ARLLSSLRRF YAYLLVKQKI SQDPTALIKS PKLVRQLPDT
LSEAQIDNLL SEPNIDDPIE HRDKAMLELL YATGLRVTEL VSLTMEQISL RQGLVRVMGK
GGKERLVPLG ELAITAVEQY IKFARAELLS MKQSDVLFPS RRGQMMTRQT FWHRIKLYAA
RAGIQCHLSP HTLRHAFATH LLNHGADLRV VQLLLGHSDL STTQIYTHVA KVRLQQLHSQ
HHPRG
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