| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0639 |
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| Symbol | |
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| ID | 4278595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 744074 |
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| End bp | 745012 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638133396 |
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| Product | Dyp-type peroxidase family protein |
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| Protein accession | YP_749337 |
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| Protein GI | 114561824 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2837] Predicted iron-dependent peroxidase |
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| TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.969415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAACC AAGTTATGCC TCGTGAACAG TTAGGGATTT GCGCAGAAGG GAATTTACAC
AGTGTGTACT TGATGTTTAA TGCCAACGAC GGTGTTGAAG ATCAGTTACG CCCATCTATT
GCTAATGTAG CCCAATATAT TTATGAACTC ACGGATCAAT ATGCCGACAG TGCTTTTAAT
GGCTTTGTGG GGATTGGGGC TAATTTTTGG GATACCTTTT ATCCAGAAGC TCGCCCAGCA
TTATTAAAAC CTTTTCCTGC CATGAGTGAA GGTAACCGTG ATGCACCAGC AATGGAATAT
GATTTGTTTA TTCATATCCG TTGTGATCGC TATGATATTT TGCACCTCGT CGCCAATGAA
ATTAACCAAA TGTTTGAAGA TTTGGTCGAG TTAGTCGATG AAGAACGCGG CTTTCGCTTT
ATGGACAGCC GTGACTTAAC TGGTTTTGTT GATGGTACAG AAAACCCTAA AGGACGTCAT
CGTCAACAAG TTGCGCTTGT CGGTGATGAA GATGAAGAAT TTGTCTCAGG TAGTTATGTT
CATGTTCAAA AATACATGCA TAACTTAAGT AAGTGGCATC GTTTACCGCT TAAAAAACAA
GAAGATATTT TTGGTCGTAC CAAAGTTGAT GATATTGAGT ATGAATCAGA AGATAAACCA
TTAACCAGCC ACACAAAACG AGTTAACTTA AAAGATCCAC ACGGTAACTC ATTAGAAATT
TTACGTCAAA GCATGCCATA TGGTTCGATT AGAGAACAAG GTTTGATGTT TATTTCAGTA
TGCCGTACAC CTGATCACTT CGAACAAATG CTGCGCAGTA TGGTGCACGG TGATGGTCAT
GGGAATCATG ATCATTTGAT GTTGTTTACT AAAGCGCTGA CAGGGTCGTC TTTCTTTGTG
CCATCATTGG ATTTTTTAAC TCAATTTGAC GATGCGTAA
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| Protein sequence | MGNQVMPREQ LGICAEGNLH SVYLMFNAND GVEDQLRPSI ANVAQYIYEL TDQYADSAFN
GFVGIGANFW DTFYPEARPA LLKPFPAMSE GNRDAPAMEY DLFIHIRCDR YDILHLVANE
INQMFEDLVE LVDEERGFRF MDSRDLTGFV DGTENPKGRH RQQVALVGDE DEEFVSGSYV
HVQKYMHNLS KWHRLPLKKQ EDIFGRTKVD DIEYESEDKP LTSHTKRVNL KDPHGNSLEI
LRQSMPYGSI REQGLMFISV CRTPDHFEQM LRSMVHGDGH GNHDHLMLFT KALTGSSFFV
PSLDFLTQFD DA
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