Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0630 |
Symbol | |
ID | 4278430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 733662 |
End bp | 735455 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638133387 |
Product | ABC transporter related |
Protein accession | YP_749328 |
Protein GI | 114561815 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACCTT CTGCGTACTT CGAAGGCCCG GTAGGGAAGT TAAATTGGCA TGTTTTAAGA TTATTATGGC CATATTTATT AGAATTTAAA GCACGAGTCT TGTTAGCCAT GATTTGCTTA ATCGTTGCTA AAATCGCGAG TGTTGGGCTG CCATTCATTC TGAAAGAATT AGTCGACACG CTGGATAAAC AATCCGCAGC CCAGATCATC GCCGTACCTA TCGGATTGGT GCTAGCTTAT GGTATGGTCC GTTTGCTCAA TGTCATTATT GGCGAGATAC GGGATACGTT ATTTGGCCGC GTTACTGAAC GAGCAATTCG CCGCCTTGGA AGGGCTGTTT TTGAACATTT ACATCGGCTC GATCTTGATT TTCATTTAGA TCGCCGTACC GGTGGCCTGT CTCGCGATAT TGAACGTGGC ACCAGTGGCG TCAGTTTTTT AATGCGCTTT ATGGTATTTA ATATTGTGCC AACACTGCTT GAGATTGCCT TAGTGATTGG TATTTTCTTT TATAACTATG GCGTCAGTTT TGCATTGATC ACCTTGTTTT CTGTGGTTGC CTATATTGGT TATTCAATTG TGGCAACAGA GTGGCGCACC GGTTATGTGC GTGATGCTGC AAGAGCTGAC TCGCTAGCTA ATACTCGTTC AATCGATAGT TTGTTAAATT ATGAAACTGT AAAATATTTT AACAATGAAG AATTTGAGTC ACAACGATAT GATTCTGCAC TTGAACAATG GGAAGTGGCA AAGCGGAAAA ACCGCTTATC ATTGTTTGCT CTTAACGGTG GTCAGGCATT AATTATTGCT GTTGCTATGA CGGCGATGAT GGGGCTGGCT GCTTATGAAG TGAGCCAAGG CTCGATGACA ATTGGTGACT TTGTCCTCAT TAATGCTTTT ATGATGCAGC TGTTTATTCC ATTAAATTTT TTAGGCTTTG TTTACCGCGA AATCCGTGGA GCATTAGCTA ACATTGAACG TATGTTTGAT ATTTTAGCCA AACAACCACA AGTGTTAGAC CATGTCGATG CAATTGAAGC CAGTCCCACT GTCGGAGCGA TAAAATTCAC CGATGTAAGC TTTCATTACG ATCAACGCGC TATTTTAAAC AGTGTCAGTT TTGATGTGCC AGCAGGGAAA AAAATTGCCG TAGTGGGCGA CAGTGGCGCA GGTAAATCAA CAATCATTAA ATTGTTATTT CGCTTTTATG ATGTTGACCG TGGGTCTATC ACTATTGATG GTATTGATGT GCGTCAGCTT AGCCAACAGG CCTTAAGAAG ATCTATCGCA GTGGTACCGC AAGATACCGT CTTATTTAAT GATTCTATAT ATGAAAATAT TAGGTATGGT CGCTCAGATG CGACTCACGA TGAGATTATC GCGGCGATTA AGTTGGCTCA TTTGAGCGAC TTTATTGAAT CATTGCCAGA TAAAGGTAAT ACCAAGGTCG GTGAGCGAGG ATTAAAGCTC TCTGGCGGCG AAAAGCAACG TGTTGCTATT GCTAGAGCGG TGTTGAAAGG TGCACCTATT TTAGTGTTTG ATGAAGCCAC ATCGTCATTA GATTCACGCT CTGAGCAAGC CATTTTGAGT GCTTTGCGAG ATGCAGCAAA AGGTCATACA AGTTTAGTGG TAGCCCATCG TTTATCGACC ATTATTGATG CAGACCAAAT AGTCGTATTG AGTAAAGGTA AGATTGTTGA GCATGGAACA CATGCCAGTT TGTTAGCTCA ACAAGGGCTT TATGCTCGGC TTTGGCATAT TCAACATGAA CAGAAAGATT TGGCGAATGG GTAA
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Protein sequence | MRPSAYFEGP VGKLNWHVLR LLWPYLLEFK ARVLLAMICL IVAKIASVGL PFILKELVDT LDKQSAAQII AVPIGLVLAY GMVRLLNVII GEIRDTLFGR VTERAIRRLG RAVFEHLHRL DLDFHLDRRT GGLSRDIERG TSGVSFLMRF MVFNIVPTLL EIALVIGIFF YNYGVSFALI TLFSVVAYIG YSIVATEWRT GYVRDAARAD SLANTRSIDS LLNYETVKYF NNEEFESQRY DSALEQWEVA KRKNRLSLFA LNGGQALIIA VAMTAMMGLA AYEVSQGSMT IGDFVLINAF MMQLFIPLNF LGFVYREIRG ALANIERMFD ILAKQPQVLD HVDAIEASPT VGAIKFTDVS FHYDQRAILN SVSFDVPAGK KIAVVGDSGA GKSTIIKLLF RFYDVDRGSI TIDGIDVRQL SQQALRRSIA VVPQDTVLFN DSIYENIRYG RSDATHDEII AAIKLAHLSD FIESLPDKGN TKVGERGLKL SGGEKQRVAI ARAVLKGAPI LVFDEATSSL DSRSEQAILS ALRDAAKGHT SLVVAHRLST IIDADQIVVL SKGKIVEHGT HASLLAQQGL YARLWHIQHE QKDLANG
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