Gene Sfri_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0615 
Symbol 
ID4278537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp718086 
End bp718550 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content43% 
IMG OID638133372 
Producthypothetical protein 
Protein accessionYP_749313 
Protein GI114561800 
COG category 
COG ID 
TIGRFAM ID[TIGR03146] cytochrome c nitrite reductase, pentaheme subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGGA ATAACTGGCT ACTGATGTTA AGTGTAGGCG TATTGTCGTT TGCCCTTATG 
AGTCAGGGAG CAAATAGCGC TGACTCTACT GAGCAAATTA ACAATGACTC ATGTATGAAA
TGCCATAAAC GCAATGGGGC AATGCAAGGT CACCATGCTC AAGAACAGTT AAAAATGAGT
TGTAGTTCAT GCCATGGTGA ACAAGGCAAT CACCCTAAGA AACCCAATGA CCTGATGGTA
TTCTCTGCGG AAAACGACAT GACAATCGAT ACTAAAAATG GCGTGTGTTT GAAATGCCAT
TCGCCTAAAA AGATAGCTCA AGCGGAGTGG ACTCACAACG TACATGCACA AAAAGTGAGT
TGTACATCTT GTCATAAACT GCATCCTGAA TCAGACCCAA TAATGGGCTT AGGAGCAAAA
GATCGCAGTA ATGTGTGCCG AAATTGCCAC ACAGTGCAGA GGTAA
 
Protein sequence
MSRNNWLLML SVGVLSFALM SQGANSADST EQINNDSCMK CHKRNGAMQG HHAQEQLKMS 
CSSCHGEQGN HPKKPNDLMV FSAENDMTID TKNGVCLKCH SPKKIAQAEW THNVHAQKVS
CTSCHKLHPE SDPIMGLGAK DRSNVCRNCH TVQR