Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0573 |
Symbol | |
ID | 4278514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 665073 |
End bp | 667229 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133331 |
Product | hypothetical protein |
Protein accession | YP_749272 |
Protein GI | 114561759 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT GGTTATTAAC TGTCGCAATG GCAGCCAGCT TTGGCGCTGC GGCAGATGAA GGCATGTGGC AACCACATCA ACTTCCCGCA ATGGCTGATG AACTTAAAGC AAAAGGCTTA GAAATAAGCG CTGATTCAAT TTCAAAATTA ACTGAATTCC CAATGAATGC CGTTATCAGC CTGGGTGGTT GTACCGCATC ATTTGTGTCA CCAAAAGGTT TGGTAGTTAC CAACCATCAC TGTGCCTATG GCTCAATTCA GTACAACTCC ACCCCAGAAA AAAACCTCCT TAAAGACGGC TTTTTAGCTA AAACTTACGC CGAAGAATTA CCGGCGACAC CTGGTTCACG TATTTTTGTA ACTGAAGCAG TAACCGATGT TACCGATAAA GTTAAAGCAA ACCAGATGGA TAAAGTGGGC AATGAGTTTT ATAAAGGTAT AGAACTACAA GAAAAAACCT TAGTTGCTGA ATGTGAAAAA GAGGATGGTT ACCGTTGCCA AGTGTATAGT TTCCATGGCG GCCTAGAATA TTATCTTGTT AAGCAGTTAG AAATTCGTGA TGTGCGTTTA GCCTATAACC CAGCCGCTAG TGTGGGCAAA TACGGCGGTG ATATCGATAA CTGGATGTGG CCTCGTCATA CCGGTGACTT CTCATTTTAT CGTGCTTACG TATCTAAAGA CGGCAAGCCT GCCGATTTTA GCAAAGACAA TGTACCGTAC GAGCCAAAAA GCTTTTTAAA AGTATCAGCT AAAGGCGTTA GCGATGGCGA CTTTGTCATG GTTGCTGGTT ATCCTGGCCG TACCAACCGA TACCGCACTG CCGATGAAGT GAACAATCAG TTTAATTGGG CTTATCCAGA AGGCAAAGTC CTGCAAGAGC GCATGATTAG CATCATCAAA GAAACCGCCT CAGAAGGCAG CGACGAGCGG ATTAAATACG AAAGCTTGAT TGCCGGTTTA GCCAATTATG CCAAAAACTT TACCTCGATG ATTGAGTATT ATGGAAAATC AACCATGCTC GCTGATCGTG AGAAAATAGA GAGCGATTTA GCCAACTGGA TCGGCAAAGA TAAAAAGCGC CAACAGCAGT ATGGCGAAAC ACTATCAAGC TTAGAAAAGT TAGTGGCTAA GAGTCAGCAA AATCAGCAAC GTGACATTTT ATTAGGTTAC ATCGGTTACA CCACTATGGT CACTACCGCT CGTGATTTGT ATCGCTTAGC TAATGAGAAA ACCTTAGCTG ATATGGCACG AGAACCAGGC TACCAAGAAC GTGACATGAC CAACTTCACT TCAAGCATGG AACGTATTGA TCGCCGTTAT GCCGCCAGTG TCGATAAAGC CCTGCTAGCC GATTTACTGA CACGTTATGC TGCATTACCT GCAGAGCAGC ATTTAGCCGC TTTAGATAAA GCATTTGGTA TTAGCAGCAA GTTCGATGCT AAAGCATTAG CTAAAACACT CGATAAAATG TACGCCAACA CCAAGCTAAA TAACAAAGAA ACTCGCTTAG CATGGATGAA CAAATCGGTT GCCGACTTTA AAGCATCTAA CGACCCATTC ATTCAATTTG CAGTACAGAC CTTTGATGCT GACATGGCGC GCGAGAAAGA GAAAAAGCAA TTAGAAGGTG ACTTAATGAA AGTACGTCCA CAATATATGG ACGCTATCAT TGCTTACAAT CGCGAGTTAG GAAAACCTGT TTATGCTGAT GCAAACTCAA GCCTGCGTGT AACGGTAGGT AACGTTAAAG GTTATTCTCC ACAGGATGGT TTAGTGGCGG TGCCTTTTAC ACGTTTAGAA GGCATTTTAG CCAAAGACAC TGGTGTTGAT CCTTTCGATG CGCCAGCTAA ACAACTTGAG CTGATTAAAC AAAAGCAATA CGGCGATTAC TACGTCAAAG CGGTTGACTC TGTACCGGTT AACTTCTTAT CTACCCTAGA CACAACGGGT GGTAACTCAG GCTCACCAAC CTTAAACGGC CGAGCTGAAC TAGTGGGTTT ACTGTTTGAT GGTGTGTACG AAAGTATCAT TGGTGACTGG GGATACGACG CACAAAGTAA CCGTTCTATC CAAGTAGACA GCCGCTACAT GCTATGGGTA ATGCAGTATT TAGATAATGC TGACAACTTA TTAGCTGAAA TGGAAATCGT TAGATAA
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Protein sequence | MKKWLLTVAM AASFGAAADE GMWQPHQLPA MADELKAKGL EISADSISKL TEFPMNAVIS LGGCTASFVS PKGLVVTNHH CAYGSIQYNS TPEKNLLKDG FLAKTYAEEL PATPGSRIFV TEAVTDVTDK VKANQMDKVG NEFYKGIELQ EKTLVAECEK EDGYRCQVYS FHGGLEYYLV KQLEIRDVRL AYNPAASVGK YGGDIDNWMW PRHTGDFSFY RAYVSKDGKP ADFSKDNVPY EPKSFLKVSA KGVSDGDFVM VAGYPGRTNR YRTADEVNNQ FNWAYPEGKV LQERMISIIK ETASEGSDER IKYESLIAGL ANYAKNFTSM IEYYGKSTML ADREKIESDL ANWIGKDKKR QQQYGETLSS LEKLVAKSQQ NQQRDILLGY IGYTTMVTTA RDLYRLANEK TLADMAREPG YQERDMTNFT SSMERIDRRY AASVDKALLA DLLTRYAALP AEQHLAALDK AFGISSKFDA KALAKTLDKM YANTKLNNKE TRLAWMNKSV ADFKASNDPF IQFAVQTFDA DMAREKEKKQ LEGDLMKVRP QYMDAIIAYN RELGKPVYAD ANSSLRVTVG NVKGYSPQDG LVAVPFTRLE GILAKDTGVD PFDAPAKQLE LIKQKQYGDY YVKAVDSVPV NFLSTLDTTG GNSGSPTLNG RAELVGLLFD GVYESIIGDW GYDAQSNRSI QVDSRYMLWV MQYLDNADNL LAEMEIVR
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