Gene Sfri_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0545 
Symbol 
ID4278713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp624707 
End bp625318 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content43% 
IMG OID638133303 
Productprotein of unknown function DUF335, SprT 
Protein accessionYP_749244 
Protein GI114561731 
COG category[S] Function unknown 
COG ID[COG3091] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.510358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA ATATTTTCAA TCTCACCCAG CGCGCGCACC AAACACTAAC GCAAGATGTT 
CACGAAAAGG GGTCTTCATT ATCAACAGGG CCTCGCCCCC ACCAAACGCA GAACACTACC 
GTGAGTAATC CATTACAACT GCAGATCTTG GCCAAAGTAG AAGCTGACTA CCTGTTAGCC 
GAACAACATT TCAAACGTCA ATTCCCACGC CCTAGTGTAC ATTTCAGCTT GCGTGGAAAA 
AGCGCCGGAA CGGCGCACTT ACAAACCAAT AAATTACGTT TTAACCCAGT ATTACTCGCT 
GAAAATCATG ACATTTTCAT TAACGAAGTG GTGCCACATG AAATTAGCCA CCTGTTGTGT 
TTCCATCTAT TTGGTAAAGT AAAACCTCAT GGTAAAGAAT GGCAGAGCGT AATGCTGACA 
ACATTTAAAA TTACTCCCAA GACCACTCAT CAACTCAATA CTCAGTCGGT CAGCGGACAA 
CAATTCGAAT ATTTTTGTGG CTGTGGCAGC ATCAACTTAA CCATAAGACG TCACAACAGA 
ATTGTCCGAG GCCAAACTCA ATATCGCTGT CGCCACTGCC AACAAACATT AACCTCTTTT 
AACCCTAAAT AA
 
Protein sequence
MFKNIFNLTQ RAHQTLTQDV HEKGSSLSTG PRPHQTQNTT VSNPLQLQIL AKVEADYLLA 
EQHFKRQFPR PSVHFSLRGK SAGTAHLQTN KLRFNPVLLA ENHDIFINEV VPHEISHLLC 
FHLFGKVKPH GKEWQSVMLT TFKITPKTTH QLNTQSVSGQ QFEYFCGCGS INLTIRRHNR 
IVRGQTQYRC RHCQQTLTSF NPK