Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0524 |
Symbol | |
ID | 4278657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 595234 |
End bp | 596853 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638133282 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_749223 |
Protein GI | 114561710 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTGGT TTAGTAACAT GTCAATCTTT AAAAAGGTTG GATTGATTTT TGTGTTATCG GTTATTATTT TTGCCGTTAA CCTTGGTATC AGCACTGTTG CGATTAATAA AAATCGTGAC ACCTTGTCTT TCATGGAAAC CAAGGTGGCA CACCGGGTTG AACTTGCAAA TCAAAATGTC ATTTATGTAC AACGCTTAGA TGAGTTATAT ACTCAAGCGG TATCGTTTGC AGATGAAGAT TTACTTGAGA ACGCCAATAA AACGTTTGTT TCACTTAACG ATAATTTAAC CGACTTATCA ACTACCGATC AGCAAGAAAC TGCAGTTTTA TCGCAATTAT CTAACAACCT CAATGAATAC AATACCATGA CACTATCATT GGCTAGAGGC ATGCTTGATG GCACGATCGA TATGGCAGAT GTGGGACAAA TTAGTCAGAA AAAAGCTAAG ATTTTCGATA AACTGACCAA CGGAATTACT GTTTATAAAG CCGACAAAGT GGATGAGTTT AGCTCTACCA TTAAAGAAGC TGGCGACCGT TCAGAGCAAA GTTTATATCT TTCATTTAGC ATCGGTATCG CATTATTGGT ATTTATGGCA CTTGCTACCA TTTCTATTGC ACGTGCCATC AGTGGTTCTG CTGGTGATGT GGCAAACTCA TTGGGTGAGT TAGCAGATGG TAAAGGTAAC TTACGCCACC AATTGACGGT TGCAGGTACT GATGAACTGG GGCAAGTATC GAGTAATTTT AACCGTTTTT TACGTTTATT AGCTGACTCT ATTCAACGTG TAGTCAGTGT AACCAGTCCA TTATTAGACA GTGCGTCATC GCTAAAAGAA CGTATGGCTG TAGCGACTAA GGCAACCAAG CAACAAAGCC ACGATGCTAA AGCCGTGCAT ATGTCGATGG AAGAAATGCG CCACTCGGTG AATGACATTT CACATAGTGC CCAGCAAGCG GCAGAAGCTG CGCAAGTTGC TGAACGAGAA GCGACGGAGG GCTTGGCTGT AGTACAACGT ACAGTGAGAA TTTCACAAGA ACTTAACTCC GGTATTGAGC TGGCATCTAA CTCCATTCAT GAATTAGCCA AAGATACCGA AAGTGTTGGC TCTATTTTGA ACGTAATTAC CTCTATTGCA GATCAAACAA ACTTATTGGC GTTAAATGCC GCTATTGAAG CAGCTAGAGC GGGTGAGCAT GGGCGAGGTT TTGCCGTTGT TGCTGATGAA GTTCGTGCAC TTGCTTCTAA AACGGCAGAC GCGACTAAAG AAATTCGTGG TGTACTAGAG AAGCTTAAAA TCGCAGCTGA ATCATCGGTA AGTACTATGG ATGTGGCGAT TACTAAGTCA TCAGAAAACG AACGTTATGC TAAAGATACC GGTGAAGTAT TAAGCTCAAT TCAATCTAAA ATTGTCAGTA TTAATAGTAT GAATACTCAT ATTGCTTCAG CCACTGAACA GCAATCTTTG GTTGCTGCAC ATGTGGCGAA TAATGTGGTT GAAATGAATG CATCATTTGA ACAAACATTG GGTATTCTTG CAGAAGTGCA GGGCATTTCA GAAGGATTAG ATGGTTTTGC TAATGAGCTT AACCACGCTA CCTCACAGTT TAAATTGTAA
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Protein sequence | MNWFSNMSIF KKVGLIFVLS VIIFAVNLGI STVAINKNRD TLSFMETKVA HRVELANQNV IYVQRLDELY TQAVSFADED LLENANKTFV SLNDNLTDLS TTDQQETAVL SQLSNNLNEY NTMTLSLARG MLDGTIDMAD VGQISQKKAK IFDKLTNGIT VYKADKVDEF SSTIKEAGDR SEQSLYLSFS IGIALLVFMA LATISIARAI SGSAGDVANS LGELADGKGN LRHQLTVAGT DELGQVSSNF NRFLRLLADS IQRVVSVTSP LLDSASSLKE RMAVATKATK QQSHDAKAVH MSMEEMRHSV NDISHSAQQA AEAAQVAERE ATEGLAVVQR TVRISQELNS GIELASNSIH ELAKDTESVG SILNVITSIA DQTNLLALNA AIEAARAGEH GRGFAVVADE VRALASKTAD ATKEIRGVLE KLKIAAESSV STMDVAITKS SENERYAKDT GEVLSSIQSK IVSINSMNTH IASATEQQSL VAAHVANNVV EMNASFEQTL GILAEVQGIS EGLDGFANEL NHATSQFKL
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