Gene Sfri_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0501 
Symbol 
ID4278581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp568305 
End bp568769 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content40% 
IMG OID638133258 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_749200 
Protein GI114561687 
COG category[R] General function prediction only 
COG ID[COG2153] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.077334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAA CATGGCTAGA TGTTGGTTTT ACTGAACTGT CTTTAGAGCA GCTTTATGGG 
TTAATGCAAT TGCGTGTAGA TGTATTTGTG GTTGAGCAAA ATTGTCCTTA TCCTGAATTA
GATGGTAAAG ATAAACACCC GCAAGCAAGA CACTTACTTG GGCTAAATGA CCAAGGTGAG
ATCCTTGCAT ATAGTCGCAT ATTAGCCCCA AACGTCAGTT ATCCTCAAGC CAGTATTGGC
CGTGTTGCCG TTGCTAAATC GGCTCGTGGC CAAGGAGTGG CGAATCAATT AATGCAAGGT
GCCATTGCTA TTGCAAAACA GCATTGGCCA AATGACAATA TTCAGATTGG GGCGCAAGAT
TATTTACGCC AATTTTATCA ACAACATGGG TTTGTAGTTA ATTCAGATGT ATACCTTGAA
GACGGTATAG AGCATCTTGA TATGTTGTTA ATCTATAATA GCTAA
 
Protein sequence
MTLTWLDVGF TELSLEQLYG LMQLRVDVFV VEQNCPYPEL DGKDKHPQAR HLLGLNDQGE 
ILAYSRILAP NVSYPQASIG RVAVAKSARG QGVANQLMQG AIAIAKQHWP NDNIQIGAQD
YLRQFYQQHG FVVNSDVYLE DGIEHLDMLL IYNS