| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0485 |
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| Symbol | |
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| ID | 4278549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 551424 |
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| End bp | 552158 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638133243 |
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| Product | two component transcriptional regulator, winged helix family protein |
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| Protein accession | YP_749185 |
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| Protein GI | 114561672 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.773776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGGAA CCGCGAAACA TAATGGCCAT GTTTGTCCGC AACATATTTT GCTAGTCGAA
GACGAACAAG ACTTGGCTAA GTTAATCATA CTTAACCTCA AAGCACTCAA CTACAGCGTC
GACCACGCCA CCACCTTGAA GCAAGCCATG CACATAATCG AGCATAAAAA GCTCGACCTT
ATATTAATGG ATCGCATGCT CCCCGATGGT GATGGCATTA TGCTGTGTGA GCAACTACGC
CAAGACGGTA AGGAAGTTCC ACTGATGCTA CTAACCGCCA AAGATTCAGA AGCAGATGTG
GTACTTGGTC TTGAAGCTGG GGCAGATGAT TACCTCGTCA AACCTTTTAG CGTATTAGAG
CTGCGCGCAC GAGTAAAAGC ACTATTAAGA CGCGGCAAAA CGCAACATGA ACAAACACAA
CAAATTGAAT TTAACAGCGT ATCCATTAAC TCCAGCACCC GTGAAGTTAC CGCCTTTAAT
AAAGCGTTAA CCCTCACCGC CCGCGAGTTT GATTTACTGC TATTTTTAGC CAAACACCCG
CAACAAGTCT TTAGCCGCAT GCAACTGCTA GAAGCGGTAT GGGGCTATAA CTACGATGGC
TATGAGCACA CTGTAAACAG CCACATCAAC CGTTTACGCA ACAAGCTTTC TTTGTGCTCG
CCTGAACATG ATCTTGTCAA AACCGTGTGG GGCGTAGGCT ACAAATTTTC ACCACCAGAG
GTGCAAGCCC ACTAA
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| Protein sequence | MNGTAKHNGH VCPQHILLVE DEQDLAKLII LNLKALNYSV DHATTLKQAM HIIEHKKLDL
ILMDRMLPDG DGIMLCEQLR QDGKEVPLML LTAKDSEADV VLGLEAGADD YLVKPFSVLE
LRARVKALLR RGKTQHEQTQ QIEFNSVSIN SSTREVTAFN KALTLTAREF DLLLFLAKHP
QQVFSRMQLL EAVWGYNYDG YEHTVNSHIN RLRNKLSLCS PEHDLVKTVW GVGYKFSPPE
VQAH
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