Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0477 |
Symbol | |
ID | 4278541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 543476 |
End bp | 543961 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638133235 |
Product | ribonuclease activity regulator protein RraA |
Protein accession | YP_749177 |
Protein GI | 114561664 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0684] Demethylmenaquinone methyltransferase |
TIGRFAM ID | [TIGR01935] RraA famliy [TIGR02998] regulator of ribonuclease activity A |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATACA ACACCTCAGA ACTCTGCGAC ATGTATATAG ATGTAGTCGA TGTCGTCGAA CCAATGTTCA GTAACTACGG TGGTTGCAGC TCCTTCGGTG GCTCAATCAG TACAATTAAG TGTTTTGAAG ATAATGGTCT GATTGCTGAT GCTTTAGAAG AAGACGGTGA AGGTAAAGTA CTATTGGTCG ATGGTGGTGG ATCGTTAAGA CGTGCCCTAC TCGATGCTAG AATTGCTGAA ATTGCTGTAG CCAACAATTG GGAAGGTATC CTCATTTACG GTTCAGTACG TGACGTTGAC GCTCTTGAAG AACTTGATAT TGGTATCCAG GCGCTTGCTT CGATTCCTGT CGGTGCTGAA AGTAACGGTG TGGGCGAAGT CGAAATTCCA GTTAATTTTG GTGGCGTGAC CTTCTTACCG GGTGACCATA TCTATGCTGA TAACACTGGC GTTATTCTGT CTCCAGAACC ATTAGATATT GAATAA
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Protein sequence | MEYNTSELCD MYIDVVDVVE PMFSNYGGCS SFGGSISTIK CFEDNGLIAD ALEEDGEGKV LLVDGGGSLR RALLDARIAE IAVANNWEGI LIYGSVRDVD ALEELDIGIQ ALASIPVGAE SNGVGEVEIP VNFGGVTFLP GDHIYADNTG VILSPEPLDI E
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