| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0461 |
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| Symbol | |
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| ID | 4277074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 528728 |
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| End bp | 530032 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638133219 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_749161 |
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| Protein GI | 114561648 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.388345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAA CACATTTATC GACCAAGAAA TTCGCCGACT TCCCTTTAAA GCCCGAAATA
CTCGCGGCAT TGAACGAGAA CGGCTTTGAG TTTTGCACGC CAATACAGGC GTTATCTTTA
CCTATTTTAC TTAATGCAAA AGATATTGCC GGACAAGCCC AAACCGGCAC CGGTAAAACT
ATGGCATTTT TAGTGGCCAC ATTTAACCAC TTACTTAATG TTGCTGCACC TGAGAGTCGC
AAAGCAACTG AACCCCGCGC TATTATTATG GCGCCTACAC GTGAATTAGC AATTCAGATT
GCTAAAGATG CCAAGTTATT AGCGGCACAT ACAGGCTTAA AAGTTGGCAT CGTTTACGGT
GGCGAAAGCT ATGAAACTCA GCGCGCTGTA TTAGACAAAG GCGTTGATAT TCTAATTGGT
ACCACCGGAC GTATTATTGA TTATGTGCGT CAGGGAGTGA TTAGTTTAAG CCACATTCAA
GCCGTTGTGC TTGATGAAGC TGACCGTATG TTTGATCTTG GCTTTATTAA AGACATTCGC
TTTTTATTCC GCAGAATGCC TGATGCTAAG TCACGCTTGA ATATGCTGTT TTCTGCCACG
CTTTCAATGA AAGTGCAGGA ATTAGCATAC GATCATATGA ATGATCCTGA AAAAGTTGAA
ATCGAACCGT TAGAAAAAAC CTCTAAAAAT ATCAAAGAGG AAATTTTCTA CCCGTCGATG
GAAGATAAGA TGCGTTTATT ACTGAGCTTA ATTGAAGAAG ATTGGCCAGA TAAAGCGATT
GTGTTTTCGA ACACAAAACA CAGCTGTGAA AAGTTGTGGT CTTATTTAGA AGGTGACGGT
CATCGTGTGG GTTTATTAAC CGGTGATGTT CCGCAAAAGA AACGTATCCG CATTCTTGAG
CAATTTACCT CTGGTGAAAT CGATGTATTA GTGGCAACAG ATGTAGCCGC ACGTGGTTTA
CATATTTCTG ATGTGTCACA CGTATATAAC TATGATTTAC CTGATGATTG TGAAGATTAT
GTGCATCGTA TTGGCCGAAC CGGTCGTGCG GGACAGAAAG GTATTTCAAT CAGTTTTGCT
TGTGAAGAAT ATGCACTGAA TTTACCTGAA ATTGAAACCT ATATTAACCA TTCTATTCCT
GTGTCTAATT ACGATAAAGA TGCGCTATTA GATGATATTC CGCCTCCGGC GCGTATTCAT
CGTAAGCCTC CTACATCTCG GACTCGTGAT GGTGGAAGTA AAGGTGCTCA TCGTAGTGGT
GGAAATACTT CACGTCCGCC ACGCCATAGG ACTCGTAGAC CATAG
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| Protein sequence | MSQTHLSTKK FADFPLKPEI LAALNENGFE FCTPIQALSL PILLNAKDIA GQAQTGTGKT
MAFLVATFNH LLNVAAPESR KATEPRAIIM APTRELAIQI AKDAKLLAAH TGLKVGIVYG
GESYETQRAV LDKGVDILIG TTGRIIDYVR QGVISLSHIQ AVVLDEADRM FDLGFIKDIR
FLFRRMPDAK SRLNMLFSAT LSMKVQELAY DHMNDPEKVE IEPLEKTSKN IKEEIFYPSM
EDKMRLLLSL IEEDWPDKAI VFSNTKHSCE KLWSYLEGDG HRVGLLTGDV PQKKRIRILE
QFTSGEIDVL VATDVAARGL HISDVSHVYN YDLPDDCEDY VHRIGRTGRA GQKGISISFA
CEEYALNLPE IETYINHSIP VSNYDKDALL DDIPPPARIH RKPPTSRTRD GGSKGAHRSG
GNTSRPPRHR TRRP
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