Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0422 |
Symbol | |
ID | 4278399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 461286 |
End bp | 462953 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638133175 |
Product | acetolactate synthase 2 catalytic subunit |
Protein accession | YP_749122 |
Protein GI | 114561609 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGGCG CGGATGCAGT AATCAAAGTA CTAGCAGCAC ATGGTGTGAC AACCGTATTT GGTTATCCTG GTGGGGCGAT TATGCCAATC TATGACGCCC TTTACGGCGG TCCTGTGGAA CACTTGCTTA GCCGTCATGA ACAAGGTGCC GCGTTTGCTG CCGTAGGATA TGCTCGTGCG AGTGGTAAAA CAGGGGTGTG TTTTGCAACA TCAGGCCCAG GGGCCACTAA TTTAATCACC TCACTTGCCG ACGCTTTACT TGACTCGGTG CCGTTAGTTG CCATAACGGG CCAAGTGTCT ACCAGTGTTA TCGGCACTGA CGCATTCCAA GAAATCGATG TATTAGGCAT GTCGTTGTCA TGCACCAAAC ACAGTTTTAT GGTCACCGAC ATCAATGAGC TTATTCCCAC CTTATATCGC GCTTTCGAAA TTGCCGCCGA AGGACGTCCT GGTCCGGTGT TAGTAGATAT ACCCAAAGAC ATCCAACTTG CAGCATTAGA ATATAAAACT CCCCTTCAAA GTGTTGCTGA TGAATTACAG CCTCAGGTTA ATGACTTAGA TGCCGCCGCA GAGTTAATTA AGCACGCTAA AAAGCCTATG TTGTATGTCG GTGGTGGTGT GGGTATGGCT GGCGCCGTTG CGCATTTACG TCAGTTTATC GACACCACAG GCATTCCATC AGTGGCGACG TTAAAAGGTT TAGGCAGTAT TGCACATGGC ACTAAAGGTT ATTTAGGTAT GTTGGGTATG CACGGTGGCA AAGGGGCAAA CCTTGCAGTG CAAGAATGTG ATTTATTGAT GGTGGTTGGC GCACGTTTTG ATGACCGTGT TACCGGCCGG CTTGCGAGTT TTGCCAGTAA TGCCAAAGTG TTACATTTAG ATATCGATGC CGCCGAAATT GGTAAATTAC GTCAAGCTGA CGTGGCGATA GCTGCTGAAC TTAGCATAGT GTTACCTGCA TTAACGGCCG CCGTTGCTGA TACGCTAGAC ATTGCTCAAT GGCAAGCTGA TGTAGAGGAG TTATCCCGTA AGCACCAATG GAATTACCAA CATCCGGGTG ATTTAATTTA TGCGCCAGCA ATGTTACGCC GTTTAGCTAA TAAACTACCA GAAGACAGTG TTGTTGCTTG TGATGTCGGC CAGCATCAAA TGTGGGTTGC ACAGCACATG TGGTTTCGTC GTCCTGAAGA TCATTTATCC AGTGCTGGCT TAGGTACTAT GGGTTTCGGC TTACCTGCTG CTATTGGTGC CCAAGTTGCC CGACCTGATG CGACGGTGGT CACTGTCTCT GGTGATGGTT CGTTTATGAT GAATGTTCAA GAATTGACCA CCATTAAGCG CCGTAAATTG CCGGTAAAAA TCTTACTGAT TGATAATCAA AAACTGGGTA TGGTTAAGCA ATGGCAACAG CTATTTTTTG AAGAACGATA CAGTGAAACA GACTTATCTG ACAATCCTAA CTTTGTCCTT ATGGCATCAG CATTTGATAT TCCAGGTCGA ACGATAACGC GAGCAGATCA AGTTGAGCAA GGGTTAGATG ATATGTTGAA TAGTAGCGGT CCTTTTATGT TACATGTGTC GATTGATGAT GCTTTTAATG TATGGCCTCT AGTGCCACCG GGTGCGAGTA ATAGTGAGAT GATGGACCAA ATGGAGAAGC AAACATGA
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Protein sequence | MRGADAVIKV LAAHGVTTVF GYPGGAIMPI YDALYGGPVE HLLSRHEQGA AFAAVGYARA SGKTGVCFAT SGPGATNLIT SLADALLDSV PLVAITGQVS TSVIGTDAFQ EIDVLGMSLS CTKHSFMVTD INELIPTLYR AFEIAAEGRP GPVLVDIPKD IQLAALEYKT PLQSVADELQ PQVNDLDAAA ELIKHAKKPM LYVGGGVGMA GAVAHLRQFI DTTGIPSVAT LKGLGSIAHG TKGYLGMLGM HGGKGANLAV QECDLLMVVG ARFDDRVTGR LASFASNAKV LHLDIDAAEI GKLRQADVAI AAELSIVLPA LTAAVADTLD IAQWQADVEE LSRKHQWNYQ HPGDLIYAPA MLRRLANKLP EDSVVACDVG QHQMWVAQHM WFRRPEDHLS SAGLGTMGFG LPAAIGAQVA RPDATVVTVS GDGSFMMNVQ ELTTIKRRKL PVKILLIDNQ KLGMVKQWQQ LFFEERYSET DLSDNPNFVL MASAFDIPGR TITRADQVEQ GLDDMLNSSG PFMLHVSIDD AFNVWPLVPP GASNSEMMDQ MEKQT
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