Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0409 |
Symbol | |
ID | 4277741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 443681 |
End bp | 444682 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638133162 |
Product | serine/threonine protein kinase |
Protein accession | YP_749109 |
Protein GI | 114561596 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.110679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAACG GTACAGGCGC AGAGTTTCAT TTTCAGGCAT TGAGACCCGA TCTCATTTTA GATGCCATCG AAAGCATCGG CGTCTTCCCT GAGACAGGGC TATTAGCATT AAACAGTTAC GAAAATCGGG TGTACCAATT CCGCTGCGAT CAAGGCATTC GTTATGTGGT GAAGTTTTAT CGACCACATC GTTGGAGTAA TGAACAAATC CAAGAAGAGC ACGATTATGC CTTGGCTTTA GCGGCTGAAG ATATTCCTAT TGCTGTTCCT ATGGTTATTG AAGGTAAAAC CTTATTTGAG TATCAAGGTT ATCGTTTTGG TCTTTTTCCG TCTATTGGCG GGCGGGCATT TGAAGTAGAC AATCTTGAAC AACTTGAATC GGTAGGCCGC TTTATTGGTC GAATTCATCA ATATGGCGCG ATGCAGCCTT TTAAATATCG TGAATCGCTG ACCCCTGCCA TTTTGGGAGA TGAGTCTTAT CGCTATTTAC GTGAAAGTGG TATTGTTGCC AGTTCGATGC AAACGGCTTT TTTTACCGTT GTAGAGCAAG TTTTAGATAA AGCCAAGCAG ATATGGCAGC AGCACAATTT TACCTCTATA CGCCTGCACG GAGACTTACA CCCTAGTAAT ATTTTATGGA CACCAGACGG ACCTGGATTT GTTGACTTAG ACGATGCTAG GCAAGGGCCC GCAGTACAAG ATTTATGGAT GATGTTGACT GGCGATCGTC AGCAGCAATT ATTACAAATT GATATTTTAT TAGAGGGATA TCAAGAGTTT TGTGATTTTG ATGCGAAACA GTTGGCACTC ATTGAGCCAT TAAGGGCATT CAGGATGGTG CACTATAATG CGTGGTTAGC CAAGCGCTGG GATGACCCTG CATTCCCGAT GAATTTCCCA TGGTTTGGCG ATATTAAGTA TTGGGAGCAA CAAACACTGG CGTTTAAAGA GCAGTTATCT GCGCTTAATG AGCCGCCATT GAGTTTACCT AGTTTTAATT AA
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Protein sequence | MDNGTGAEFH FQALRPDLIL DAIESIGVFP ETGLLALNSY ENRVYQFRCD QGIRYVVKFY RPHRWSNEQI QEEHDYALAL AAEDIPIAVP MVIEGKTLFE YQGYRFGLFP SIGGRAFEVD NLEQLESVGR FIGRIHQYGA MQPFKYRESL TPAILGDESY RYLRESGIVA SSMQTAFFTV VEQVLDKAKQ IWQQHNFTSI RLHGDLHPSN ILWTPDGPGF VDLDDARQGP AVQDLWMMLT GDRQQQLLQI DILLEGYQEF CDFDAKQLAL IEPLRAFRMV HYNAWLAKRW DDPAFPMNFP WFGDIKYWEQ QTLAFKEQLS ALNEPPLSLP SFN
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