Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0386 |
Symbol | |
ID | 4278226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 415922 |
End bp | 416491 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638133140 |
Product | transport-associated |
Protein accession | YP_749087 |
Protein GI | 114561574 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGAA GGTTACTCAT CATCTCAGTC CTGGCGATGT TGCAGGGGTG TGCTGGTGCT GTCATGGTTG GCGCCGTTAG CGGTGCCAAG ATGGTAAATG ATGAGCGCAG CATGAGCACT CAAATCAGCG ACACTAATGC TGACTTTGTT ATTGCTAGTG CGCTATCAAA ACATGATGAC CTTAATAATC AAACCAATAT CGCCGCGGTT GTGATGAACA ACAATGTATT GATGATAGGC CAAGCACCTA ACTCAATGCT GCGCGATAAA GCGATTAAAG TGGTACAAGA TTTACAAATT GGCGGCAAAA TACATAACCA AATTCGTATT GGCACGCCAA CGTCATTTAC CACACGCAGC AACGACACTT GGGTAACAAC CAAAGTGAAA GGCCGCATGT TAAATGAAAA ATCACTCGAT ATTACTCGAG TGAAAGTGAT TACCGAAAAC GGCGAAGTCT TTTTGCTTGG GTTAATTGAC CGCAAGCAAG CTGATTTAGC GGTTGATATC GCGCGAAATA CTGCAGGCGT TCGCAAAGTG ATTAAGGTTT TTGAATACAC TGAATCTTAA
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Protein sequence | MIRRLLIISV LAMLQGCAGA VMVGAVSGAK MVNDERSMST QISDTNADFV IASALSKHDD LNNQTNIAAV VMNNNVLMIG QAPNSMLRDK AIKVVQDLQI GGKIHNQIRI GTPTSFTTRS NDTWVTTKVK GRMLNEKSLD ITRVKVITEN GEVFLLGLID RKQADLAVDI ARNTAGVRKV IKVFEYTES
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