Gene Sfri_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0365 
Symbolgmk 
ID4277609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp394220 
End bp394843 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content41% 
IMG OID638133119 
Productguanylate kinase 
Protein accessionYP_749066 
Protein GI114561553 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTC GTGGAAATCT TTTTATTGTG TCAGCCCCTA GTGGCGCAGG TAAATCATCA 
CTTATATCAA CACTATTAAA AGATAAACCC AGCGATAAAC AGGTTTCAGT GTCACATACG 
ACCCGCAAAC CTCGTCCAGG CGAAGTCGAT GGACAACATT ATCATTTTAT TACTGTTGAA 
CAATTTAAAG CACTAATTGC CCAAAATGCC TTTATTGAAT GGGCCGAAGT TTTTGGCAAT 
TTTTATGGCA CTTCCAAGCT CGTCATCGAA CAAACCTTAG ATAAAGGTAT CGATGTATTT 
CTTGATATTG ATTGGCAGGG CGCAGAACAA GTAAAAAAAT TAATGGAAAC GGCTATTGGA 
GTGTTTATTT TACCGCCGTC TAAAGCTGAG CTTGAACGTC GTTTAACTGG CCGAGGTCAG 
GATAGTCAGC AAGTGATTGA TTCGCGCATG GCACAAGCCG TTTCGGAAAT GTCACATTAT 
GCGCAATACG AATTTATAAT TGTAAATGAT GATTTTGATA ACGCGCTAGC CGATTTAAGC 
GCCATTATTC GCAGTCAAAG GCTAACCTGT GCTAGTCAGC AGCATGCGCA AAATGATATG 
ATTGTTGATC TCTTGGCAGA TTAA
 
Protein sequence
MSTRGNLFIV SAPSGAGKSS LISTLLKDKP SDKQVSVSHT TRKPRPGEVD GQHYHFITVE 
QFKALIAQNA FIEWAEVFGN FYGTSKLVIE QTLDKGIDVF LDIDWQGAEQ VKKLMETAIG 
VFILPPSKAE LERRLTGRGQ DSQQVIDSRM AQAVSEMSHY AQYEFIIVND DFDNALADLS 
AIIRSQRLTC ASQQHAQNDM IVDLLAD