Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0364 |
Symbol | rpoZ |
ID | 4277608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 393881 |
End bp | 394159 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638133118 |
Product | DNA-directed RNA polymerase subunit omega |
Protein accession | YP_749065 |
Protein GI | 114561552 |
COG category | [K] Transcription |
COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGCG TAACTGTAGA AGACGCCGTA AATAAAATCG GCAACCGTTT TGATATGATC CTGGTTGCAG CGCGTCGTGC ACGCCAAATC GCCGTCCAAG GTAAAGAACC TATGGTTGAT GAGATGAATG ATAAACCAAC GGTTGTCGCT TTACGTGAAA TCGAATTAGG TTTAGTCACC TCAAACACTT TAGATGCTGA TGAGCGCCAA ACTGTTCGTG AACGTGAAGC TGCTGAAATT GCCGCTGTCG CAGCCATTGC AGAAGGCCGC GTTTTATAA
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Protein sequence | MARVTVEDAV NKIGNRFDMI LVAARRARQI AVQGKEPMVD EMNDKPTVVA LREIELGLVT SNTLDADERQ TVREREAAEI AAVAAIAEGR VL
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