Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0343 |
Symbol | |
ID | 4277151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 370706 |
End bp | 373114 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638133097 |
Product | hypothetical protein |
Protein accession | YP_749044 |
Protein GI | 114561531 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCAA TATCGCTAAC CGAGTTGTTA TCTCCCATTG GGCGTTTTGT CTTATGGGTA TTATTGCTAC TTACAATGTT AGCCTCGGGC TTAATACAAT GGCAACAGGG CGCGCATATT CAAACTGATA TTTTGGCGAT GTTGCCACAT TTACAGCAAG ACAAACTCAC TGAAACAGCA TTAAACAGAG TTGAACAGCA ACTCGCAAAC CAAGTGTATA TTGCAGTAAA AGCCAATAAT GACAACCAAG CTATCAGTGC CGCACAGCAA CTGATGGATG CGCTAGATAA ACAGCCTCAA CCGCCCTTTA TTCACATTCG TAGCGGCGCG GATGATCATC TGCAAGACTT GGCTAAATTG TATTTCGAAC ATCGCTTTAC CCTACTCACC GCCGAGCAAG CTAAAGCGAT TGAAACAGAT AATTGGCGAC AGCTGCTTAA CGCGGCCCAA AATCAACTTT ATAGCGCATT TGGTTTTGCC AACAGCCAAC TGCTCAGCAA TGACCCGTTA CTGATGTTTC CAGCCAACTT ACTGGCGTTA TCACCTAATA GTGCGCTGCG AAGCCAACAA GGCATTTTAC TCACCGATAC TACCGAGGGT GTGGCTGCAA TTGTCATGGC CAAAGGCCGC GACAGTGCTT TTAGCCCGAC CGCTCAGCAA CAGCAAATAC AAGCATTAAA GTCTGCGTTT AGCCAAGTGA CGCAGCACTA CCCTGATGTC AGTTTTCTTA AGGCTGGTGC GCTTTTTCAT GCGATCGCCG CCACTGAGTC GGCCAAACAA GAAATCAGCC GAATTGGCTT AATTTCCATG TTGGGGATTA TCTTATTAGT CTGGTTGGCC TTTCGGTCGA TTATGCCGTT ATTTGCCGCA CTACTGACGT TAACAACTGG TGTGGTATTT GCGTTTGTCG CCACCTTAAG TATTTTCGGT GAGTTGCACT TACTGACACT AGTGTTTGGT ACCAGCTTAA TTGGTGTCGC CATAGATTAC AGCTTTCACT TTTATTGCGA AAAACAAGCT CATCCCAATA ACAACGCAAC AGACACCTTA AAGCAGATTT TTCCGGCGCT CACTCTCGCC CTTGCTACCA GTGCCAGTGC CTTTATCGCC ATTGGCTTTA CCCCATTCCC GGGAATGCAA CAAGTGGCAG TATTTTGTGC AGCGGGGTTA ATTGGTGCAT ACCTAACGTT GTTATTGGTG TTTCCATTAC TGGGCAACCA TGCGCTTAAA CCGACGCCAG GATTAACCCT TGCCCAAGGG TATTTGGCGC TATTACAACG TATTTTCACC CCAAATCAAT TGTGGCAAAA AATAGCTATA GCGGCTTTGC TCATTGGTTT GGCAACAATA TTGTTTTTCG GTTTGTCACA AACGGATTCT AACGATGATA TTCGTCAGTT ACAGCAAAGC CCTGCAGCTA TCACCACCGA AGAGAACCAA CTAAGGCAAC TGCTCAGCGG CGGCACCGAC AACCAATTTA TTGTAGTCAG CGGTCCCAAT GAACAAGCTT TATTACAAAC ATTAGAGCAA TTGACACCAG TACTGGATAA AGCAGTCACT GATGGTGAAT TAGACCAAGC AATCAGTCTC AGCCGCTTTA TGCCCAGCAT TGCCAAACAA CAACAACACT ATCAGTTACA GCAACAGCTT TATGGGCAAC ATTTAGACGA GATCATCAAC GAAATGGGCC TTGATGACAG CATAAGCACC AGTATGATTG CACAACTTAA TCACGCCGAA TCACAATGGT TAACCCCAAC CATGGTGCTA GCCAAAGCTA ATGATGATTT ACAGACATTA TGGCTTGGGG CGATTCCAAC AACAGACAAA CCCCAGCAAT TTGGCGCCAT AGTGTTACTC GGTGGCATAC ATTCGTTAGC CTCTCTTGAG CAACGGCTGA CTGAACATAA ATGGCCTTTA GGGCAAGTGC GGTTAATCGA TAAGGTCGGT GATATATCCC ATTTAATGGG CAAGTATCGC CAACTAACAT TACAACTATT AATGTGGGTA TTTGCCTTAG CTAGCCTAAT TTTTAGCATT AAATACGGTA TTAAGTTGGC ATTCGCTATC GTCGCAGTCC CTGCTTTATC AGTACTGCTC ACGCTAGCCT GTTTAGGCCT TGTCGGCTCG AACATTAGCT TGTTTCACGC CTTAGCGCTT ATTTTAGTGC TAGGCATTGG TATCGATTAC AGCCTATTTT TTGCCGAGGC CAAGCACACT AGTCGCGGAG TGATGATGGC AATCTTTATG TCAGCCTGTT CAACACTATT GGCTTTTGGG TTGCTGGCGC TGAGTCAAAC CCATGCCATT CACTTTTTTG GTTTAACGCT TCTTTTTGGG ATCAGTTTTT CATTTTTACT GGCACCGTTT ATTTCATTTA TTACTAGGAA AACTGTAAAT GCCATTTAG
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Protein sequence | MQPISLTELL SPIGRFVLWV LLLLTMLASG LIQWQQGAHI QTDILAMLPH LQQDKLTETA LNRVEQQLAN QVYIAVKANN DNQAISAAQQ LMDALDKQPQ PPFIHIRSGA DDHLQDLAKL YFEHRFTLLT AEQAKAIETD NWRQLLNAAQ NQLYSAFGFA NSQLLSNDPL LMFPANLLAL SPNSALRSQQ GILLTDTTEG VAAIVMAKGR DSAFSPTAQQ QQIQALKSAF SQVTQHYPDV SFLKAGALFH AIAATESAKQ EISRIGLISM LGIILLVWLA FRSIMPLFAA LLTLTTGVVF AFVATLSIFG ELHLLTLVFG TSLIGVAIDY SFHFYCEKQA HPNNNATDTL KQIFPALTLA LATSASAFIA IGFTPFPGMQ QVAVFCAAGL IGAYLTLLLV FPLLGNHALK PTPGLTLAQG YLALLQRIFT PNQLWQKIAI AALLIGLATI LFFGLSQTDS NDDIRQLQQS PAAITTEENQ LRQLLSGGTD NQFIVVSGPN EQALLQTLEQ LTPVLDKAVT DGELDQAISL SRFMPSIAKQ QQHYQLQQQL YGQHLDEIIN EMGLDDSIST SMIAQLNHAE SQWLTPTMVL AKANDDLQTL WLGAIPTTDK PQQFGAIVLL GGIHSLASLE QRLTEHKWPL GQVRLIDKVG DISHLMGKYR QLTLQLLMWV FALASLIFSI KYGIKLAFAI VAVPALSVLL TLACLGLVGS NISLFHALAL ILVLGIGIDY SLFFAEAKHT SRGVMMAIFM SACSTLLAFG LLALSQTHAI HFFGLTLLFG ISFSFLLAPF ISFITRKTVN AI
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