| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0275 |
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| Symbol | |
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| ID | 4278078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 303137 |
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| End bp | 304900 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638133029 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_748976 |
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| Protein GI | 114561463 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.125713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA AAGGTTTTTT TTCCTGGTTT CGTAAAGATA AGCCCGTCCC TGAAGTTGAA
GAACAGCAGC AACTCGATGT TGATGCGGAG AATGAAGTTG TAACAGAGAC TGCAGAGCAA
CCTCAACAAG CTGAGCAACT AGAGCAAACT GAAGCAACAG CGCGCCTAGA CGTTGAACGT
CTTGAGCAAG AACGTCTTGA AACTGAGCTT GCAGAACAAG CCCGTATCGA CGCTGAGCGT
ATTGCTGCAG ATAAGTTGGC CGCTGATGTT TTAACCTCAG AAAAGCTCGC CGCAGAAAAG
CTAGCTACTG AGCAGGCAGA GCAACAAAAG CAAGCACTAG AGACTGAACG TTTAGAAGCT
GAACGTGTTG AACAACTTCG TCTTGAACAG CTTGATCTAG AAAATAAGCG TCTTGAGCAA
GAGCGTGTCG ACAATGAACG AGCAGAACTC GCCCGTATCG ATGCTGAGCG TATTGCTGCA
GAAAAGCTAG CCACTGAGCA GGCTGAGCAA CAAAAGCAAG CACAAGAGAC TCAGCGTTTA
GAAACTGAAC GCTTAGAAGC CGAACGTGTT GAACAACTGC GTCTCGAGCA GCTTAATTTA
GAAAAGAAGC GTCTTGAGCA AGAGCGTGTC GACAATGAAC GAGTAGAACA AGCCCGTGTC
GATGCTGAGC GTACTGCAGC AGAAACGTTA GCAACTGAAG CCTTAGCTGC AGAACTAGCC
GCACAGCAAT TAGCAGAACA ACAATTAGCA GAACAACAGG CAGCCGAGCA ACAAGCACCG
ATAGAGTCTA TTGAGTTAGC ACAACAAGAT GAACCGCAAG CTAAACCACA AAAAGAGGGT
ATGTTTGCCC GCTTAAAACG TGGCTTAATG CGCACCAGTG AGAATATTGG TTCTGGCTTC
ATTGGCTTAT TCCGCGGTAA AAAAATTAAT GAAGAGTTAT TTGAAGAACT CGAAGAGCAA
TTGTTAATCG CTGATGTGGG TGTTGAAACC ACCAATAAAT TAATTAAAAG CCTGACCGAG
CATGCATCTC GTAAGCAGCT TAAAGATGCT GAAGCACTTT ATGATTTAAT GCGTGAAGAA
ATGCAAAAAA TGCTCGATCC GGTAGCTATT CCTTTAGTTC CCGATAACGC CAATGGCCCA
TTTGTCATTC TTATGATTGG TGTCAATGGT GTAGGTAAAA CCACCACGAT TGGTAAACTG
GCTAAACAGT ACCAAAGCCA AGGTAAATCT GTCATGTTAG CTGCCGGCGA TACCTTCCGC
GCAGCGGCAG TTGAGCAGTT ACAAGTGTGG GGACAACGCA ATAACATTCC GGTAGTGGCC
CAGCATACTG GCGCAGACAG TGCTTCAGTT ATATTCGATG CCTTACAAGC CGCTAAAGCG
CGTAAAGTAG ACGTATTAAT TGCAGATACA GCGGGACGTT TGCAAAACAA AAGTCACTTA
ATGGAAGAGT TGAAAAAAGT CGTGCGAGTG ATGAAAAAAC TCGATCCAGA TTCGCCTCAT
GAAGTCATGC TAACGCTAGA TGCTAGCACT GGTCAGAATG CTATTAGCCA AGCACAGTTG
TTTAAAGAAG CGGTTGGCGT GACGGGGATT ACCATCAGTA AATTAGATGG TACCGCCAAA
GGCGGGGTGA TTTTTGCGAT TGCCGATAAG TTTTCTATTC CTATTCGTCA TATTGGTGTC
GGTGAGCAAA TTGATGATTT GCGTACTTTT AACTCCAATG ATTTTATTGA AGCATTATTT
AGCCAGGATA AAACGGACCA ATAA
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| Protein sequence | MAKKGFFSWF RKDKPVPEVE EQQQLDVDAE NEVVTETAEQ PQQAEQLEQT EATARLDVER
LEQERLETEL AEQARIDAER IAADKLAADV LTSEKLAAEK LATEQAEQQK QALETERLEA
ERVEQLRLEQ LDLENKRLEQ ERVDNERAEL ARIDAERIAA EKLATEQAEQ QKQAQETQRL
ETERLEAERV EQLRLEQLNL EKKRLEQERV DNERVEQARV DAERTAAETL ATEALAAELA
AQQLAEQQLA EQQAAEQQAP IESIELAQQD EPQAKPQKEG MFARLKRGLM RTSENIGSGF
IGLFRGKKIN EELFEELEEQ LLIADVGVET TNKLIKSLTE HASRKQLKDA EALYDLMREE
MQKMLDPVAI PLVPDNANGP FVILMIGVNG VGKTTTIGKL AKQYQSQGKS VMLAAGDTFR
AAAVEQLQVW GQRNNIPVVA QHTGADSASV IFDALQAAKA RKVDVLIADT AGRLQNKSHL
MEELKKVVRV MKKLDPDSPH EVMLTLDAST GQNAISQAQL FKEAVGVTGI TISKLDGTAK
GGVIFAIADK FSIPIRHIGV GEQIDDLRTF NSNDFIEALF SQDKTDQ
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