| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0258 |
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| Symbol | |
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| ID | 4277029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 284564 |
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| End bp | 286150 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638133012 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_748959 |
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| Protein GI | 114561446 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCAAT GGTTGTATTG TTTACTGGTT GTGTTTGTAG CACTTCCGCT TGGGGCAACA
GAAATGCCCC TCAACATGAC TCAAGGCGTG ACAGATATCA GTGGCAAGGT TTACGACCTC
CATATGACAA TTCTTTATAT CTGTTGTGTA ATTGGGTTAG TGGTGTTTGG GATCATGATT
TACTCAATGA TTTATCACCG CAAATCAAAA GGCGCTGTCG CGGCCAATTT TCACGAAAGT
ACCAAAGTGG AAATTGCTTG GACCGTCATC CCTTTCATCA TCTTAATCGG CATGGCTATT
CCAGCCACCA AAACCTTGAT TGCTATGGAA GATCCCAGTG ATGCTGATCT CACCATAAAA
ATTACTGGGT CGCAGTGGAA GTGGCATTAC AGCTATTTTG ATAAAGACAT CGAATTTTAC
AGCACATTAT CCACCCCCAG AGCTCAAATT GATGGCAGTG AGGCCAAAGG AGAACATTAC
CTCCTCGAAG TCGATAAGCC ATTAGTACTG CCTATTAATC AAAAAGTGCG CTTCTTGATG
ACATCTGATG ATGTTATTCA TTCATGGTGG GTGCCGGCGT TTGCCGTTAA AAAAGATGCC
AATCCAGGCT TTATTAACGA ATCGTGGACC CGCATTGATA AACCCGGTAT TTACCGCGGC
CAATGTGCCG AATTATGCGG TAAAGACCAT GGTTTCATGC CGATTGTGGT GCAAGCATTA
TCGGAGGCCG ATTTTGATAA TTGGTTAGTG GAGCAAAAAC AACTAGCAAG TAATGCTGCT
GCAGCCGCTG CGGCATCAAT GTCTAAAACC TTGTCTCTTG AGGAGCTAAC CTCACAAGGT
GAGCAAATCT ATATTGCTAG GTGCGCCGCT TGTCATCAAC CCAATGGCGC GGGTCTTCCT
GGTGTATTCC CATCATTAAT TGGCAGCCCT ATCATAAAAG GGCCTGTTGA AGATCACCTG
AATATCGTCT TAAACGGTAA ACCAGGAACC GCAATGCAAG CCTTTGCAAA ACAACTTAGC
GCCCAAGAAA TTGCCGCAGT AATTACCTTT GAGCGTAATG CCTGGGGCAA TAATAGCGGT
GATGTAGTGC AAGCAGTTGA TATAGGCAAC TTTTTAGGCA GTAACGAGGC AAGCACCGAA
CCAAGTAAAG CAGTAACCGA TGCAGCAAGT ACTATTGCAG CCACGGCAAC TGACATTACC
GATGCGGTTA CCGACAAAGC CAATCAAGTT GTCGAAGCCG TAGCAGAAAC TGTTGTACCA
GAGGATCTGC CCACTTTAAC CTTGGAGCAA TTAATTGCTG AAGGTGAGCA GGTTTATGCT
ACGACATGCG CTGCGTGTCA CCAAGCCACT GGCGCAGGTT TACCTGGCGC TTTCCCTTCA
CTTATTGGCA GCCCTGTTGT TACCGGACCG GTTAGCGGAC ATATCGATAT CGTTATGCAC
GGTAAACCAG GAACCGCAAT GCAGGCATTT AGTGGTCAAC TTAGCCCTCG CAAGATGGCG
GCGGTGATTA CGTATGAGCG CAATGCGTGG GGCAATAATT CTGGCGAGGC GGTGCAACCT
GCCGATGTCG CTAGCCATGG ACAGTAG
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| Protein sequence | MKQWLYCLLV VFVALPLGAT EMPLNMTQGV TDISGKVYDL HMTILYICCV IGLVVFGIMI
YSMIYHRKSK GAVAANFHES TKVEIAWTVI PFIILIGMAI PATKTLIAME DPSDADLTIK
ITGSQWKWHY SYFDKDIEFY STLSTPRAQI DGSEAKGEHY LLEVDKPLVL PINQKVRFLM
TSDDVIHSWW VPAFAVKKDA NPGFINESWT RIDKPGIYRG QCAELCGKDH GFMPIVVQAL
SEADFDNWLV EQKQLASNAA AAAAASMSKT LSLEELTSQG EQIYIARCAA CHQPNGAGLP
GVFPSLIGSP IIKGPVEDHL NIVLNGKPGT AMQAFAKQLS AQEIAAVITF ERNAWGNNSG
DVVQAVDIGN FLGSNEASTE PSKAVTDAAS TIAATATDIT DAVTDKANQV VEAVAETVVP
EDLPTLTLEQ LIAEGEQVYA TTCAACHQAT GAGLPGAFPS LIGSPVVTGP VSGHIDIVMH
GKPGTAMQAF SGQLSPRKMA AVITYERNAW GNNSGEAVQP ADVASHGQ
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