Gene Sfri_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_0255 
Symbol 
ID4277026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp281522 
End bp282397 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content41% 
IMG OID638133009 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_748956 
Protein GI114561443 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAA AGTATCAAAC TTATTATGTG CCAGCCCAAA GTGCTTGGCC AATAATCGGT 
GCTATAGGTT TATTTTTAAT TGCGTTTGGC GCAGGAAATT ATGTACAACA ATTAACCACT
GAAAAAACCT CTGGCGGTTA CATTTTAATA ACTGGCTTGG CCGTGATTAT CTTTATGATT
TTTGGTTGGT TTAAGACCGT TATTGATGAA TCAATGGCTG GACTGTATTC ACCGCAGATG
GATCGTTCAT TTAGACAGGG AATGAGTTGG TTTATTTTTT CAGAGATTAT GTTTTTTGGG
GCATTTTTCG GCGCGCTATT CTATGCCCGC ATGATTTCAG TACCTTGGCT TGGTGGCGCA
TCTAACAATG CCATGACCCA TGAAGTGTTA TGGCCTGCAT TTGAAGCTAT GTGGCCATTG
GTTAAAACAC CTGATGGCAC TGCAACTGAA GCTATGCCAT GGACGGGATT GCCATTAATT
AACACCATTA TATTGCTAAC ATCGTCAGTT ACTTTGCACT TTGCTCATAC CAACCTTGAA
AAAGCCAATC GTAAGCCCTT GATAATCTGG TTAGCGTTAA CGGTAATTTT GGGGATTGCG
TTTCTCTGTT TGCAGGTTGA AGAATATAGC CATGCTTACC AAGAAATGGG GTTAACGCTC
TCTTCTGGTG TCTACGGCAA CACCTTCTTT TTGTTAACCG GTTTTCACGG CATGCACGTC
ACTATCGGTA CCCTGTTCTT GATTATTTTA TTACTCAGAA TTGTGAAGGG TCACTTTACG
CACGACAAGC ATTTCGCTTT TCAAGCGGGG AGTTGGTATT GGCACTTCGT TGATGTGGTG
TGGTTATGCT TATTCATTTT CGTATACGTA CTATAA
 
Protein sequence
MTTKYQTYYV PAQSAWPIIG AIGLFLIAFG AGNYVQQLTT EKTSGGYILI TGLAVIIFMI 
FGWFKTVIDE SMAGLYSPQM DRSFRQGMSW FIFSEIMFFG AFFGALFYAR MISVPWLGGA
SNNAMTHEVL WPAFEAMWPL VKTPDGTATE AMPWTGLPLI NTIILLTSSV TLHFAHTNLE
KANRKPLIIW LALTVILGIA FLCLQVEEYS HAYQEMGLTL SSGVYGNTFF LLTGFHGMHV
TIGTLFLIIL LLRIVKGHFT HDKHFAFQAG SWYWHFVDVV WLCLFIFVYV L