| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0250 |
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| Symbol | |
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| ID | 4277021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 277998 |
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| End bp | 278909 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133004 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_748951 |
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| Protein GI | 114561438 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAC CTCTTACTAT TAGTCAGGTT CAACCTAAGA TAACTCTACA ATGGCGCGCC
TATTTTGAAA TGACCAAACC CAAAGTCGTA GCACTTATGT TGCTTACGGT ATTGGTCGGC
ATGTGTTTAT CTGTGCCTGG CATTGTACCG TTACAACCTT TGGTTGCGGG AATGGCTGGT
ATTGCGATGA TGGCAGGCTC TGCGGCGGCG TTTAATCACT TAATTGACCG TAAAATAGAT
GGTTTGATGG CTCGAACTTA TAATCGTCCG CTGCCTAAAG GTAAAATCTC CACCACTAAA
GCGGTAACCT TTGCGGTGTC GCTTGGATCA CTCGGCTTTG TGGTGTTATA TACCTTAGTT
AATCCCCTCA CAGCTTGGTT AACCTTTGCC AGTTTGATTG GTTATGCTTT GGTGTATACA
GCCTACCTTA AGCGGGCGAC CTCACAAAAC ATTGTCATTG GTGGCTTAGC CGGCGCTATG
CCGCCATTAT TAGGCTGGAC CGCAATAACC AATGAACTGC ATGGTTACGC TCTACTACTG
GTTATTATTA TCTTCACTTG GACTCCACCG CATTTTTGGG CATTAGCCAT TCATCGCCGT
AAAGAATATG CCAAGGTCGA TATTCCAATG CTACCAGTTA CACACGGGGT CGAATTTACC
AAAACCTGTA TTTTGCTTTA CACCATTCTA TTAGCCATAG CCTGCCTACT ACCCGTTTTA
GTCGGCATGT GTGGTCCAAT ATATTTGGTG GGTTCAACGG TACTCAGTTG TGGTTTTATT
TATAAAGCGT GGCAGTTAAA GTTTCATGAC TATCCAGAAC TGTCTATGCA AGTATTTAAA
TTCTCGATTT ATCATTTAAT GGTGTTGTTT ATTGTATTAT TAGTTGACCA TTACTTTTGG
GTAAACGCTT AA
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| Protein sequence | MTKPLTISQV QPKITLQWRA YFEMTKPKVV ALMLLTVLVG MCLSVPGIVP LQPLVAGMAG
IAMMAGSAAA FNHLIDRKID GLMARTYNRP LPKGKISTTK AVTFAVSLGS LGFVVLYTLV
NPLTAWLTFA SLIGYALVYT AYLKRATSQN IVIGGLAGAM PPLLGWTAIT NELHGYALLL
VIIIFTWTPP HFWALAIHRR KEYAKVDIPM LPVTHGVEFT KTCILLYTIL LAIACLLPVL
VGMCGPIYLV GSTVLSCGFI YKAWQLKFHD YPELSMQVFK FSIYHLMVLF IVLLVDHYFW
VNA
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