| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0213 |
|---|
| Symbol | |
|---|
| ID | 4277947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 235801 |
|---|
| End bp | 236151 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638132967 |
|---|
| Product | plastocyanin domain-containing protein |
|---|
| Protein accession | YP_748914 |
|---|
| Protein GI | 114561401 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4633] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATTAA TTAACTTATT TTGTGTGGCA TTGATTGCCC TTATCGTTTG GTGGTTTTGG
TTATATAAAC CCAAAGCCAC CACTCATCAA GCAACAAACG CTATTGTGGT AAAAGACGGC
GTTTACTCTC CGGCAAGGAT AACTGTGCCG GCCAATACAG CGACACAATT AACCTTTTTA
CGACAGGACA AAGCCGGTTG CTCTGCCAGT TTGTTATTTC CTGACTTAGA CATTAGCGAA
GAGCTGCCTC TGGACAAATC TGTGGTTATT TCGCTGCCAG CGCTAGCCAA AGGAGAGTAT
CCGTTTCATT GCCAAATGCA GATGTACAAA GGGGTATTAC TAGTTGAGTA A
|
|---|
| Protein sequence | MLLINLFCVA LIALIVWWFW LYKPKATTHQ ATNAIVVKDG VYSPARITVP ANTATQLTFL
RQDKAGCSAS LLFPDLDISE ELPLDKSVVI SLPALAKGEY PFHCQMQMYK GVLLVE
|
|---|
| |