Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0207 |
Symbol | |
ID | 4278133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 228610 |
End bp | 229503 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638132961 |
Product | transcriptional regulator, LysR family protein |
Protein accession | YP_748908 |
Protein GI | 114561395 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATC CGATCACTAT CGACGCATTA CGCGCCTTAG ATGCAATTGA ACGTAAGGGC AGTTTTGCTG CTGCAGCAGC ATCGTTATAT CGAGTGCCAT CAGCACTGAC TTACACCATC AAAAAACTTG AAGATGATAT GGGTACGGCG TTATTTGACC GTACAAAGCA AAAAGCACAA CTGACACCCG CAGGTAAAAT TGTATTAGAG CAAGGACGGC AGATTTTGTT AGCCACCAAT CGGTTGGTTG ATTCAGTGCA GCAATTAGAA TCTGGCTGGG AAACCGAAAT ACGGTTATCA CGCGACACGG TTATCCCTCA GGGGGTATTG TTTCAATTAA TTGAACAATT TAATCAGCTA GAACATTCGG TCGACATTAG TGTCGATGTT GAAGCCGTCG GTGGTGGTTG GGATGCATTA CATAGCCGAC GCGCCGATAT TGTGATTGGT GCATCTGGCG AGTTACCAAG AGGTGTATTT CAAACCCATA AAATAGGCGA GATTGAATTT GTGTTTGCGG TTGCGCCACA TCATCCATTG GCGTTTGTTG ATGGCATATT AGAAGCCGAC AAATTAACAG ATTATGCTTC GGTTGTGGTT GCTGATACAT CACAACTTTT ACCCACTCGA AGCAGCGGTA TGTTCAACAG TAAGCAGGTA ATTAGGGTCA ACACCATGGA AACTAAAATA GCGGCACAGC GACAAGGTTT GGGGATTGGT TTTTTACCTA GGCACATGGT GCAATGTTAT TTTGATAGTG GCGAATTGAT TGAAAAATCC TGTTCAATTC CAAGACCAAA TCAAAGTTTG TACATTGCTT GGCATAAAGA TCATCAAGGC CGTGCATTTG ACTGGTTTGT GGACCATTTA CCTAAAGCCG ACTGGGGTTT ATAA
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Protein sequence | MQNPITIDAL RALDAIERKG SFAAAAASLY RVPSALTYTI KKLEDDMGTA LFDRTKQKAQ LTPAGKIVLE QGRQILLATN RLVDSVQQLE SGWETEIRLS RDTVIPQGVL FQLIEQFNQL EHSVDISVDV EAVGGGWDAL HSRRADIVIG ASGELPRGVF QTHKIGEIEF VFAVAPHHPL AFVDGILEAD KLTDYASVVV ADTSQLLPTR SSGMFNSKQV IRVNTMETKI AAQRQGLGIG FLPRHMVQCY FDSGELIEKS CSIPRPNQSL YIAWHKDHQG RAFDWFVDHL PKADWGL
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