| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0190 |
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| Symbol | |
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| ID | 4277592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 208988 |
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| End bp | 210139 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638132944 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_748891 |
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| Protein GI | 114561378 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00904916 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACAC TACCAGATCT AAAAAGTTGT TTTACACAGC TGATTGCAGC ACCATCAGTC
AGTGCACTCG AAGCAGAACA CGATATGAGT AATCATGCAG TTATCAACTT GTTGCAGAAT
TGGTTCAGTG AACTGGGTTT TGAATGCGAA ACCCCCACGG TCGAAGACTC GCGTAATAAA
CAGAACCTGA TTGCCAGAAT AGGCAGCGGC AGTGGTGGGC TTTTACTTGC GGGCCATACA
GATACAGTGC CCTTTGATGA AGGCCGTTGG AGCCAAAGTC CATTTGAGAT GGTTGAAAAA
GACAATCGTT GGTACGGCTT AGGCACTTGC GACATGAAAG GCTTTTTTGC GTTGGTACTC
GAAGCATTAA AAGACATGCC GTTGGATCAG TTCAAACGTC CGCTGACTAT TTTTGCTAGT
GCAGATGAAG AAACCACCAT GAGCGGCGCT AAAGCATTTG CCGACTCAAA AGTTATCGCA
CCTGATTATG CGGTTATTGG TGAACCCACC AGCTTAAAAC CTGTCTATAT GCATAAGGGG
CATTTAGCCC AAGGGATCCG CGTGATTGGT CGAAGTGGTC ATTCATCTGA TCCTGCTCGC
GGCCTTAATG CTATTGAAGT TATGCATAAA GTCATTAGCC AGCTAATGAA GCTAAAGCAG
CACTTAAGCG AGAATTATCG CGAAGATGCG TTTACTGTCC CCTACCCAAC CATGAACTTT
GGCCATATTC ATGGCGGTGA TGCCGCAAAC CGTATTTGTG GTTGTTGTGA TTTACACTTA
GATATTCGCC CTTTACCGGG AATGGAGTTA GCGGATCTGG AATTAATGGT GTTGAACTAC
TTATCTGACA TCAGTAAAGA GTATCCTGGC AGCATAAGTG TCAGTACTTT GTACCCAGGC
GCTGAATCGT TTGCAGGAAA AGCAGATAAT CCATGGACCA AACTCGTTGC AGAATTGTCT
GGCAACGAAG CAGAAGTGGT CAACTATTCA ACTGAAGCAC CTTATATCAA CAAACTAGGT
TGCCAAACCT TAGTACTAGG CCCAGGTAGC ATTAACCAAG CCCACCAGCC AGATGAATTT
ATTGGCCTAG AATACTTAAC GCCAACGGTA GAATTGATCA AAAAAATGAT TTTTCATGCC
TGCATTAAGT AA
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| Protein sequence | MSTLPDLKSC FTQLIAAPSV SALEAEHDMS NHAVINLLQN WFSELGFECE TPTVEDSRNK
QNLIARIGSG SGGLLLAGHT DTVPFDEGRW SQSPFEMVEK DNRWYGLGTC DMKGFFALVL
EALKDMPLDQ FKRPLTIFAS ADEETTMSGA KAFADSKVIA PDYAVIGEPT SLKPVYMHKG
HLAQGIRVIG RSGHSSDPAR GLNAIEVMHK VISQLMKLKQ HLSENYREDA FTVPYPTMNF
GHIHGGDAAN RICGCCDLHL DIRPLPGMEL ADLELMVLNY LSDISKEYPG SISVSTLYPG
AESFAGKADN PWTKLVAELS GNEAEVVNYS TEAPYINKLG CQTLVLGPGS INQAHQPDEF
IGLEYLTPTV ELIKKMIFHA CIK
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