| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0180 |
|---|
| Symbol | |
|---|
| ID | 4277582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 188342 |
|---|
| End bp | 188635 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638132930 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_748881 |
|---|
| Protein GI | 114561368 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3245] Cytochrome c5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.245077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TGTTAGCAAT GACTGCAGTA GCTGCCTTAA CTTTGTCTGC AAATGTATTT
GCTCAAGAAG GTGAAGCTAT TTATAATAAA GCGTGTCAAG TATGTCACAG CATGGGTGTG
GCCGGTGCGC CTAAAGTTCA TGACACTGCG GCATGGGAAC CACGTCTAGC AAAAGGTTTA
GATGCCTTAG TGGGTTCAGT TAAGTCTGGT TTAAACGCAA TGCCACCAGG TGGTATGTGT
ACTGACTGTA CTGATGAAGA TTACAAAAAC GCAATTCAGT TTATGTCTAA GTAG
|
|---|
| Protein sequence | MKKLLAMTAV AALTLSANVF AQEGEAIYNK ACQVCHSMGV AGAPKVHDTA AWEPRLAKGL
DALVGSVKSG LNAMPPGGMC TDCTDEDYKN AIQFMSK
|
|---|
| |