Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0166 |
Symbol | rpmD |
ID | 4277236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 179085 |
End bp | 179273 |
Gene Length | 189 bp |
Protein Length | 62 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638132916 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_748867 |
Protein GI | 114561354 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000187774 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACTA AAACTTTAAA AGTCACACAG ACTAAAAGCA GCATTGGTCG TTTACCAAAA CACCGTGCAA CCTTAACCGG TTTAGGCCTA CGCCGCATTA ATCACACTGT TGAAGTTGAA GATACACCTT CAGTTCGCGG TATGATTAAC AAGGTGTACT ACATGGTTTC GGTGGAGGAA TTAGGATAA
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Protein sequence | MATKTLKVTQ TKSSIGRLPK HRATLTGLGL RRINHTVEVE DTPSVRGMIN KVYYMVSVEE LG
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