| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0153 |
|---|
| Symbol | rplV |
|---|
| ID | 4277818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 173606 |
|---|
| End bp | 173938 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638132903 |
|---|
| Product | 50S ribosomal protein L22 |
|---|
| Protein accession | YP_748854 |
|---|
| Protein GI | 114561341 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000202891 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTTT TAGCTAAACA TCGTTTTGCT CGTACGTCTG CGCAGAAGGC CCGTCTAGTT
GCTGATCAAA TTCGCGGATT GCCTGTTTCT AAGGCACTCG AGATTTTGAC ATTCAGCCCC
AAGAAAGCCG CCGTACTAGT AAAAAAAGTA CTTGACTCAG CTATCGCAAA CGCCGAACAC
AACGAAGGTG CTGACATTGA TGAGCTTAAA GTTGGAGCCG TCTTCGTAGA TGAAGGCCCA
ACAATGAAGC GTATCATGCC ACGTGCTAAA GGCCGCGCTG ATCGTATCAT GAAGCGTACC
AGTCACATTA CTGTGGTTGT AGCAGATCGC TAG
|
|---|
| Protein sequence | MEVLAKHRFA RTSAQKARLV ADQIRGLPVS KALEILTFSP KKAAVLVKKV LDSAIANAEH
NEGADIDELK VGAVFVDEGP TMKRIMPRAK GRADRIMKRT SHITVVVADR
|
|---|
| |